RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 TCRBV9S1A1TA0A576 114 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 EEF2KO00418 725 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SYN3O14994 580 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 TBC1D4O60343 1298 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 AVILO75366 819 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 H6PDO95479 791 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 EFEMP2O95967 443 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 HSMCR30P0CW71 290 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 TSHRP16473 764 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 GLUD2P49448 558 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 NUDT2P50583 147 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 S100A12P80511 92 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 GNA12Q03113 381 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 CDC20Q12834 499 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 RGS21Q2M5E4 152 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 GRTP1Q5TC63 336 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 FAXCQ5TGI0 409 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 PDPK2PQ6A1A2 396 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 NIPAL1Q6NVV3 410 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 RANBP10Q6VN20 620 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 ANKRD33Q7Z3H0 272 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 NKAIN4Q8IVV8 208 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 NPWQ8N729 165 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 CATSPER1Q8NEC5 780 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 BHLHE22Q8NFJ8 381 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 RMND5BQ96G75 393 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 HS6ST2Q96MM7 605 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 DEFB118Q96PH6 123 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 GPR62Q9BZJ7 368 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 MAN1C1Q9NR34 630 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 OSER1Q9NX31 292 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 VTI1BQ9UEU0 232 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 FETUBQ9UGM5 382 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 ADAM28Q9UKQ2 775 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 PNMA8BQ9ULN7 279 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 ARHGAP26Q9UNA1 814 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 PLLPQ9Y342 182 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SNX10Q9Y5X0 201 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SH3D21A4FU49 640 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SYNDIG1LA6NDD5 238 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 KLF11O14901 512 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 ATE1O95260 518 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 F9P00740 461 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 LTA4HP09960 611 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 EPB42P16452 691 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 TPSB2P20231 275 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SLC11A1P49279 550 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 POU3F4P49335 361 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 GPR15P49685 360 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SLC18A2Q05940 514 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SEMA5AQ13591 1074 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 TPSAB1Q15661 275 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 GPR107Q5VW38 600 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 DHRS4L2Q6PKH6 230 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 LILRA2Q8N149 483 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 MCUQ8NE86 351 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 OR52K2Q8NGK3 314 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 AGR3Q8TD06 166 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 HTR3CQ8WXA8 447 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 HDAC2Q92769 488 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 APBB2Q92870 758 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 FUBP3Q96I24 572 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 PPP1R36Q96LQ0 422 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 CDRT15Q96T59 188 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SMOC2Q9H3U7 446 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 CYP4F12Q9HCS2 524 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 INTS7Q9NVH2 962 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 CLEC4AQ9UMR7 237 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 RNF11Q9Y3C5 154 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 TET1Q8NFU7 2136 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 A0A0A0MRY4 1105 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 IRAK2O43187 625 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 MTSS1O43312 755 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 ERCC2P18074 760 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 EPHA3P29320 983 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 PCP4P48539 62 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 HSPA13P48723 471 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SLC9A3P48764 834 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 RACK1P63244 317 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 PPP2R5DQ14738 602 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 MROH9Q5TGP6 573 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 C16orf46Q6P387 395 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 KDELC1Q6UW63 502 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 RSPO2Q6UXX9 243 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 UTS2BQ765I0 119 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SETD3Q86TU7 594 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 GPR180Q86V85 440 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 TMEM173Q86WV6 379 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 LINC00518Q8N0U6 118 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 TTC9BQ8N6N2 239 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 ADCY4Q8NFM4 1077 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 TEX47Q8TBZ9 253 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 ENKURQ8TC29 256 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SEPT8Q92599 483 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 TAMM41Q96BW9 452 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SCLYQ96I15 445 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 B3GALT6Q96L58 329 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SPATA13Q96N96 652 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 GAS2L1Q99501 681 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 TKTL2Q9H0I9 626 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms