RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SATB1Q01826 763 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 CTSL3PQ5NE16 218 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 RFLNAQ6ZTI6 216 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 LRRC34Q8IZ02 419 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 CCDC63Q8NA47 563 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 PJA1Q8NG27 643 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 RAB3IL1Q8TBN0 382 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 KCTD4Q8WVF5 259 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 ZNF75CPQ92670 426 aaPredicted RBP14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 KCNJ9Q92806 393 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 UBXN10Q96LJ8 280 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 GPR78Q96P69 363 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 CCT8L2Q96SF2 557 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 NSRP1Q9H0G5 558 aaKnown RBP14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 TAS2R13Q9NYV9 303 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 SIRPGQ9P1W8 387 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 MED16Q9Y2X0 877 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 ATG2BQ96BY7 2078 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 WDR91A4D1P6 747 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 STK25O00506 426 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 KLF11O14901 512 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 VPS26AO75436 327 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 RHOBTB1O94844 696 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 PYGLP06737 847 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 VIMP08670 466 aaKnown RBP14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 LTA4HP09960 611 aaKnown RBP14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 GM2AP17900 193 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 UGT1A6P19224 532 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 C5AR1P21730 350 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 DRD4P21917 467 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 UGT1A1P22309 533 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 UGT1A4P22310 534 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 UGT1A3P35503 534 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 UGT1A5P35504 534 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 P2RY2P41231 377 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 STARD6P59095 220 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 CREB5Q02930 508 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 DLG1Q12959 904 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 PDAP1Q13442 181 aaKnown RBP14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 STARD3Q14849 445 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 CST6Q15828 149 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 FAM83EQ2M2I3 478 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 FBXO43Q4G163 708 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 ATP13A5Q4VNC0 1218 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 C2orf27AQ580R0 203 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 HENMT1Q5T8I9 393 aaKnown RBP14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 AGAP9Q5VTM2 703 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 ZNF776Q68DI1 518 aaPredicted RBP14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 LRRC8EQ6NSJ5 796 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 CYP2U1Q7Z449 544 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 NUDCD3Q8IVD9 361 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 TRAM1L1Q8N609 369 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 IL17RCQ8NAC3 791 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 OR2T3Q8NH03 318 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 RDH11Q8TC12 318 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 NXNL1Q96CM4 212 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 COQ10AQ96MF6 247 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 ZSCAN5AQ9BUG6 496 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 FAM107BQ9H098 131 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 MANSC1Q9H8J5 431 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 SYTL2Q9HCH5 934 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 IGSF5Q9NSI5 407 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 ZDHHC3Q9NYG2 299 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 COPG2Q9UBF2 871 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 GNPTGQ9UJJ9 305 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 RUVBL2Q9Y230 463 aaKnown RBP14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 ITM2BQ9Y287 266 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 OAS3Q9Y6K5 1087 aaKnown RBP14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 PIKFYVEQ9Y2I7 2098 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 GOLGA8CPA6NN73 597 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 H3BMM5 538 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 EBAG9O00559 213 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 WNT9AO14904 365 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 AP1G1O43747 822 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 CCDC166P0CW27 439 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 ZNF37AP17032 561 aaPredicted RBP14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 DRD3P35462 400 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 ETV3P41162 512 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 NSG1P42857 185 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 LIG3P49916 1009 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 COPAP53621 1224 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 CCDC15Q0P6D6 951 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 CNTN1Q12860 1018 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 CSHL1Q14406 222 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 PCLAFQ15004 111 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 ZNF284Q2VY69 593 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 HSF5Q4G112 596 aaPredicted RBP14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 PIP5KL1Q5T9C9 394 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 UGT3A1Q6NUS8 523 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 TMEM207Q6UWW9 146 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 Q6ZVL8 140 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 PIM3Q86V86 326 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 MECRQ9BV79 373 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 SPATA16Q9BXB7 569 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 CLPBQ9H078 707 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 CD84Q9UIB8 345 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 SIT1Q9Y3P8 196 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 FADS3Q9Y5Q0 445 aa14.11□□□□□ -0.15
CYB561A3-216ENST00000540755 IGLV3-16A0A075B6K0 115 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 SHISA7A6NL88 538 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms