RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 ZNF883P0CG24 379 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 GPR1P46091 355 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 CDK3Q00526 305 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 CALCOCO2Q13137 446 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 STAT4Q14765 748 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 HIF1AQ16665 826 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 KHDC1Q4VXA5 237 aaKnown RBP16.56■□□□□ 0.24
UBC-208ENST00000540700 ZNF648Q5T619 568 aaPredicted RBP16.56■□□□□ 0.24
UBC-208ENST00000540700 UBAP2Q5T6F2 1119 aaKnown RBP16.56■□□□□ 0.24
UBC-208ENST00000540700 IL27RAQ6UWB1 636 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 PTAR1Q7Z6K3 402 aaPredicted RBP16.56■□□□□ 0.24
UBC-208ENST00000540700 HEATR4Q86WZ0 1026 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 GALNT15Q8N3T1 639 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 TRAM1L1Q8N609 369 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 HDAC10Q969S8 669 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 COX14Q96I36 57 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 UBL7Q96S82 380 aaPredicted RBP16.56■□□□□ 0.24
UBC-208ENST00000540700 APOOQ9BUR5 198 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 SPATA16Q9BXB7 569 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 C1QTNF7Q9BXJ2 289 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 TEX101Q9BY14 249 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 FAM96AQ9H5X1 160 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 ARFGAP3Q9NP61 516 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 IL1RAPL1Q9NZN1 696 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBC-208ENST00000540700 RIMKLBQ9ULI2 386 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 PCYT1BQ9Y5K3 369 aaPredicted RBP16.56■□□□□ 0.24
UBC-208ENST00000540700 TEX264Q9Y6I9 313 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 V9GYY5 206 aaPredicted RBP16.56■□□□□ 0.24
UBC-208ENST00000540700 TENM4Q6N022 2769 aa16.56■□□□□ 0.24
UBC-208ENST00000540700 ZCWPW2A0A1B0GU75 182 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 AP3B1O00203 1094 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 VILLO15195 856 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 INPP4BO15327 924 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 SRP72O76094 671 aaKnown RBP16.55■□□□□ 0.24
UBC-208ENST00000540700 THEGLP0DJG4 465 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 TSHRP16473 764 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 TEAD1P28347 426 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 MC4RP32245 332 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 FOXN2P32314 431 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 ELK3P41970 407 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 ABCG1P45844 678 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 ARL4CP56559 192 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 NXPH1P58417 271 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 CAMK2BQ13554 666 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 PDE1CQ14123 709 aaPredicted RBP16.55■□□□□ 0.24
UBC-208ENST00000540700 KIF19Q2TAC6 998 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 ANKRD20A4Q4UJ75 823 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 ADAMTSL4Q6UY14 1074 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 TMEM135Q86UB9 458 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 ANKMY2Q8IV38 441 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 GSPT2Q8IYD1 628 aaKnown RBP16.55■□□□□ 0.24
UBC-208ENST00000540700 UNC5BQ8IZJ1 945 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 MFSD2AQ8NA29 543 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 IFT81Q8WYA0 676 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 SLC39A7Q92504 469 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 EBNA1BP2Q99848 306 aaKnown RBP16.55■□□□□ 0.24
UBC-208ENST00000540700 C19orf43Q9BQ61 176 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 CHMP2BQ9UQN3 213 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 PTPRBP23467 1997 aa16.55■□□□□ 0.24
UBC-208ENST00000540700 FAM237BA0A1B0GVD1 139 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 TMEM202A6NGA9 273 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 TLR4O00206 839 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 DKK1O94907 266 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 PRAMEF1O95521 474 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 GOT2P00505 430 aaKnown RBP16.54■□□□□ 0.24
UBC-208ENST00000540700 FUCA1P04066 466 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 F7P08709 466 aaPredicted RBP16.54■□□□□ 0.24
UBC-208ENST00000540700 MYBL2P10244 700 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 ARCN1P48444 511 aaKnown RBP16.54■□□□□ 0.24
UBC-208ENST00000540700 AFF3P51826 1226 aaKnown RBP16.54■□□□□ 0.24
UBC-208ENST00000540700 PDE1BQ01064 536 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 PDIA2Q13087 525 aaKnown RBP16.54■□□□□ 0.24
UBC-208ENST00000540700 FZD2Q14332 565 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 SEMA3AQ14563 771 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 SUZ12Q15022 739 aaKnown RBP16.54■□□□□ 0.24
UBC-208ENST00000540700 DNAJC21Q5F1R6 531 aaKnown RBP16.54■□□□□ 0.24
UBC-208ENST00000540700 CASC4Q6P4E1 433 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 PIANPQ8IYJ0 282 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 PDIK1LQ8N165 341 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 DTX3LQ8TDB6 740 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 NAT14Q8WUY8 206 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 ZNF669Q96BR6 464 aaPredicted RBP16.54■□□□□ 0.24
UBC-208ENST00000540700 STAMBPL1Q96FJ0 436 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 FRMD8Q9BZ67 464 aaPredicted RBP16.54■□□□□ 0.24
UBC-208ENST00000540700 WDR26Q9H7D7 661 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 FAM114A2Q9NRY5 505 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 KLF15Q9UIH9 416 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 ANKRD6Q9Y2G4 727 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 SNX11Q9Y5W9 270 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 MAD1L1Q9Y6D9 718 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 NAV2Q8IVL1 2488 aa16.54■□□□□ 0.24
UBC-208ENST00000540700 AGAP14A8MT82 685 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 GOLGA8KD6RF30 607 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 GOLGA8TH3BQL2 631 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 MTX2O75431 263 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 C1QL1O75973 258 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 ITPKBP27987 946 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 HADHAP40939 763 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 CTSKP43235 329 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms