RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 GDAP1Q8TB36 358 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SCG3Q8WXD2 468 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SNX19Q92543 992 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 LPGAT1Q92604 370 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ROPN1BQ9BZX4 212 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 VIPAS39Q9H9C1 493 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ROPN1Q9HAT0 212 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CTNNAL1Q9UBT7 734 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SMG5Q9UPR3 1016 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 DMTF1Q9Y222 760 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CRYL1Q9Y2S2 319 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ABCA7Q8IZY2 2146 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 IGLV3-16A0A075B6K0 115 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 A0A1W2PPC4 97 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TLDC2A0PJX2 215 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SLC25A14O95258 325 aaPredicted RBP18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TEAD1P28347 426 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 AKT2P31751 481 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PPARGP37231 505 aaPredicted RBP18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CD151P48509 253 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CDK3Q00526 305 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 B4GALNT1Q00973 533 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CEP85LQ5SZL2 805 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ZNF648Q5T619 568 aaPredicted RBP18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 GRTP1Q5TC63 336 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ADGRD1Q6QNK2 874 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TRIM74Q86UV6 250 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ZC3HC1Q86WB0 502 aaKnown RBP18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TDRPQ86YL5 185 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TMEFF1Q8IYR6 380 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 DCLK2Q8N568 766 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 NAT14Q8WUY8 206 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ATXN7L3BQ96GX2 97 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 COX14Q96I36 57 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 BMFQ96LC9 184 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TTC1Q99614 292 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 COPS8Q99627 209 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 RBBP8Q99708 897 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 LGR4Q9BXB1 951 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PPCSQ9HAB8 311 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 EURLQ9NYK6 297 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ZNF180Q9UJW8 692 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 OR1A2Q9Y585 309 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 IKBKGQ9Y6K9 419 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SLCO1B1Q9Y6L6 691 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PLXNA2O75051 1894 aa18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ZNF106Q9H2Y7 1883 aaKnown RBP18.73■□□□□ 0.59
TNFRSF1A-213ENST00000540022 UBA6A0AVT1 1052 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PRAMEF26H0Y7S4 382 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 H0Y8X5 98 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 AGPSO00116 658 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 FPGTO14772 594 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 NUDT1P36639 197 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PTGER3P43115 390 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ITIH4Q14624 930 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 RNF187Q5TA31 235 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 GCNT7Q6ZNI0 430 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PHYKPLQ8IUZ5 450 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 RBFAQ8N0V3 343 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 FUBP1Q96AE4 644 aaKnown RBP18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 HIC2Q96JB3 615 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 VPS39Q96JC1 886 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 HSPA12BQ96MM6 686 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TEX101Q9BY14 249 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 DUSP15Q9H1R2 295 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 RHOJQ9H4E5 214 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 WDR26Q9H7D7 661 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PSMC3IPQ9P2W1 217 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TBK1Q9UHD2 729 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 OAS3Q9Y6K5 1087 aaKnown RBP18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 LRRK1Q38SD2 2015 aa18.72■□□□□ 0.59
TNFRSF1A-213ENST00000540022 HMX2A2RU54 273 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PFDN6O15212 129 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CDH16O75309 829 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ZNF7P17097 686 aaPredicted RBP18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 MAOBP27338 520 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SPRP35270 261 aaPredicted RBP18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 LIMK2P53671 638 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 BMPR2Q13873 1038 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 RASA2Q15283 850 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 KRT71Q3SY84 523 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 LDLRAP1Q5SW96 308 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ZNF549Q6P9A3 640 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ACVR1CQ8NER5 493 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 FOXJ1Q92949 421 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SERAC1Q96JX3 654 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 APOOQ9BUR5 198 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 P2RY12Q9H244 342 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 EIF2B4Q9UI10 523 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 VPS9D1Q9Y2B5 631 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 MTO1Q9Y2Z2 717 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 HS3ST3A1Q9Y663 406 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PRSS21Q9Y6M0 314 aa18.71■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TRPM6Q9BX84 2022 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 MEI4A8MW99 385 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PRMT5O14744 637 aaPredicted RBP18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CD27P26842 260 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 AKT1P31749 480 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CNR2P34972 360 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms