RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 PCSK6P29122 969 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 MSX2P35548 267 aaPredicted RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 ACVRL1P37023 503 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 AVPR1AP37288 418 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 SLC11A2P49281 568 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 SEPHS1P49903 392 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 CCR3P51677 355 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 ADARP55265 1226 aaKnown RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 AP2B1P63010 937 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 CBX3Q13185 183 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 FSCBQ5H9T9 825 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 RALGPS1Q5JS13 557 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 ANKRD22Q5VYY1 191 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 LRRC8BQ6P9F7 803 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 ZCCHC23Q6ZST2 131 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 HTR3DQ70Z44 454 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 GPR149Q86SP6 731 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 PRPF39Q86UA1 669 aaKnown RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 CDKL3Q8IVW4 592 aaPredicted RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 APLFQ8IW19 511 aaPredicted RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 ULK2Q8IYT8 1036 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 UMODL1-AS1Q8N2C9 162 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 CCNYQ8ND76 341 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 RSAD2Q8WXG1 361 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 JADE3Q92613 823 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 HDAC11Q96DB2 347 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 NSUN5Q96P11 429 aaKnown RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 S1PR5Q9H228 398 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 PCDH9Q9HC56 1237 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 SEPT10Q9P0V9 454 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 DPP7Q9UHL4 492 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 LGALS13Q9UHV8 139 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 ZNF510Q9Y2H8 683 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 COMMD3-BMI1R4GMX3 469 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 CAPN8A6NHC0 703 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 J3KR12 359 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 RNF103O00237 685 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 TRIM38O00635 465 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 TRAFD1O14545 582 aaPredicted RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 METTL18O95568 372 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 PEX11BO96011 259 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 TFPTP0C1Z6 253 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 NME1P15531 152 aaKnown RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 FCARP24071 287 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 PTPN3P26045 913 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 DDX6P26196 483 aaKnown RBP eCLIP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 VIPR2P41587 438 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 MAGEA8P43361 318 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 PSMD7P51665 324 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 HPCAP84074 193 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 PLOD1Q02809 727 aaPredicted RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 ARHGAP15Q53QZ3 475 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 CMPK2Q5EBM0 449 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 C6orf163Q5TEZ5 329 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 SDCCAG8Q86SQ7 713 aaPredicted RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 ARID3BQ8IVW6 561 aaPredicted RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 ZNF567Q8N184 647 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 LEMD2Q8NC56 503 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 HTR3CQ8WXA8 447 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 ASIC4Q96FT7 647 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 OXNAD1Q96HP4 312 aaPredicted RBP6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 CNBD2Q96M20 576 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 SIKE1Q9BRV8 207 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 KCNK13Q9HB14 408 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 TDP1Q9NUW8 608 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 PLK2Q9NYY3 685 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 SUSD2Q9UGT4 822 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 ADAMTS6Q9UKP5 1117 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 VPS9D1Q9Y2B5 631 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 TRIOBPQ9H2D6 2365 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 CROCCQ5TZA2 2017 aa6.08□□□□□ -1.44
PDZRN4-203ENST00000539469 COL6A3P12111 3177 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 LOC100653049A0A140TA62 436 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 RHPN2P1A8MT19 583 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 HACD1B0YJ81 288 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 PRR5-ARHGAP8B1AHC4 643 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 B4E171 279 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 DNALI1O14645 258 aaPredicted RBP6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 TYROBPO43914 113 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 MMP20O60882 483 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 TBL1XO60907 577 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 FAM155BO75949 473 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 KRT34O76011 436 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 TMCC1O94876 653 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 TMEM63AO94886 807 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 CNOT4O95628 575 aaKnown RBP6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 LATS1O95835 1130 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 HOXD9P28356 352 aaPredicted RBP6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 OR1E1P30953 314 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 CD68P34810 354 aaPredicted RBP6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 ARHGAP8P85298 464 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 CDK16Q00536 496 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 PDE1BQ01064 536 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 RPL6Q02878 288 aaKnown RBP6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 PDK1Q15118 436 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 UAP1L1Q3KQV9 507 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 FAM78AQ5JUQ0 283 aa6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 RNASEH2BQ5TBB1 312 aaKnown RBP6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 JMJD6Q6NYC1 403 aaPredicted RBP6.07□□□□□ -1.44
PDZRN4-203ENST00000539469 ADAMTSL4Q6UY14 1074 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms