RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CENPOQ9BU64 300 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TDRD15B5MCY1 1934 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 A0A0J9YYE9 177 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ANKDD1BA6NHY2 528 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ISM1B1AKI9 464 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 MICAL2O94851 1124 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ICAM3P32942 547 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ARFIP1P53367 373 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PRKG2Q13237 762 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 KLF1Q13351 362 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PLEKHG6Q3KR16 790 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ELMOD1Q8N336 334 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SMG8Q8ND04 991 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PCDH19Q8TAB3 1148 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 RDH11Q8TC12 318 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TRPM4Q8TD43 1214 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CERS2Q96G23 380 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 UNC93B1Q9H1C4 597 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 FAIMQ9NVQ4 179 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TNPO3Q9Y5L0 923 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SMAD9O15198 467 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PRODHO43272 600 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 RP2O75695 350 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 MSR1P21757 451 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CDKN2CP42773 168 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 IDH3AP50213 366 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 MLLT6P55198 1093 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PTPN11Q06124 597 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 GALNT11Q8NCW6 608 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 OR2L2Q8NH16 312 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SNX15Q9NRS6 342 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 AASSQ9UDR5 926 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SLC7A8Q9UHI5 535 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 MYO18BQ8IUG5 2567 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 NCOA6Q14686 2063 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TRAFD1O14545 582 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 DHX15O43143 795 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 HOXB6P17509 224 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 RPL38P63173 70 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ZMYND11Q15326 602 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 HLFQ16534 295 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM119Q4V9L6 283 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 MOXD1Q6UVY6 613 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SLC30A10Q6XR72 485 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TP63Q9H3D4 680 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 RGCCQ9H4X1 137 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SEMA3GQ9NS98 782 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TAS2R13Q9NYV9 303 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TAS2R7Q9NYW3 318 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ERVV-1B6SEH8 477 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 EI24O14681 340 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF182P17025 639 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 RELAQ04206 551 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 GRK1Q15835 563 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 BATFQ16520 125 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SYT16Q17RD7 645 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TCEAL5Q5H9L2 206 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ARMC6Q6NXE6 501 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 IPCEF1Q8WWN9 437 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 MAELQ96JY0 434 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 C7orf26Q96N11 449 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TCRBV7S2A1N4TA0A589 114 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 hCG_2039718K7EN88 272 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CYB561D2O14569 222 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PPEF2O14830 753 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ACOX3O15254 700 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 XPNPEP2O43895 674 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ITGA2P17301 1181 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ZBTB6Q15916 424 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TKFCQ3LXA3 575 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 VSTM1Q6UX27 236 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 RPTNQ6XPR3 784 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF730Q6ZMV8 503 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 LRRC55Q6ZSA7 311 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 APTXQ7Z2E3 356 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 AMIGO1Q86WK6 493 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CHST4Q8NCG5 386 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CEP76Q8TAP6 659 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PMEPA1Q969W9 287 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 FBXL20Q96IG2 436 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF317Q96PQ6 595 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 MGME1Q9BQP7 344 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PCDHAC1Q9H158 963 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 IL1RAPQ9NPH3 570 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 KIAA1257Q9ULG3 409 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PAPSS1O43252 624 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 NR2F1P10589 423 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 RPS2P15880 293 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 NAT1P18440 290 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CCR1P32246 355 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 BCAT1P54687 386 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 NRG1Q02297 640 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM62Q0P6H9 643 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ATXN7L3Q14CW9 347 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CPTPQ5TA50 214 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF557Q8N988 423 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 USP7Q93009 1102 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SMARCD1Q96GM5 515 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 DPAGT1Q9H3H5 408 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 UPB1Q9UBR1 384 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms