RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 TXNDC16Q9P2K2 825 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 NKX1-2Q9UD57 310 aaPredicted RBP7.93□□□□□ -1.14
COL21A1-212ENST00000535941 SUN2Q9UH99 717 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 EVLQ9UI08 416 aaPredicted RBP7.93□□□□□ -1.14
COL21A1-212ENST00000535941 ITM2BQ9Y287 266 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 PCDHB1Q9Y5F3 818 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 ANHXE9PGG2 379 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 NEDD8-MDP1E9PL57 170 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 H0Y858 1186 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 STX16-NPEPL1H3BU86 382 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 STX16O14662 325 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 PER2O15055 1255 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 NVLO15381 856 aaKnown RBP7.93□□□□□ -1.14
COL21A1-212ENST00000535941 ATP5HO75947 161 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 SRP72O76094 671 aaKnown RBP7.93□□□□□ -1.14
COL21A1-212ENST00000535941 PRR35P0CG20 571 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 TROVE2P10155 538 aaKnown RBP eCLIP7.93□□□□□ -1.14
COL21A1-212ENST00000535941 MYL2P10916 166 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 ZNF30P17039 623 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 CLCN2P51788 898 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 BCL2L1Q07817 233 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 PTK2BQ14289 1009 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 GPRC6AQ5T6X5 926 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 HENMT1Q5T8I9 393 aaKnown RBP7.93□□□□□ -1.14
COL21A1-212ENST00000535941 METTL2BQ6P1Q9 378 aaKnown RBP7.93□□□□□ -1.14
COL21A1-212ENST00000535941 DPY19L3Q6ZPD9 716 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 ZCCHC23Q6ZST2 131 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 NLRP8Q86W28 1048 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 RNF135Q8IUD6 432 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 PHYKPLQ8IUZ5 450 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 ZNF781Q8N8C0 355 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 PNPLA1Q8N8W4 532 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 TMIEQ8NEW7 156 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 CFAP61Q8NHU2 1237 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 MAPK15Q8TD08 544 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 CCDC126Q96EE4 140 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 RUVBL2Q9Y230 463 aaKnown RBP7.93□□□□□ -1.14
COL21A1-212ENST00000535941 WNT6Q9Y6F9 365 aa7.93□□□□□ -1.14
COL21A1-212ENST00000535941 WDR91A4D1P6 747 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 PSMD11O00231 422 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 SOD1P00441 154 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 RBP1P09455 135 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 ALPIP09923 528 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 ACADSP16219 412 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 SERPINA4P29622 427 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 CPOXP36551 454 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 MMP12P39900 470 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 TMPRSS15P98073 1019 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 OVGP1Q12889 678 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 MAP7Q14244 749 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 AARS2Q5JTZ9 985 aaKnown RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 AGAP9Q5VTM2 703 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 METTL21CQ5VZV1 264 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 PIWIL4Q7Z3Z4 852 aaKnown RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 LDB1Q86U70 411 aaPredicted RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 CHST14Q8NCH0 376 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 GPR26Q8NDV2 337 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 GDPD5Q8WTR4 605 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 FGF13Q92913 245 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 EBF4Q9BQW3 602 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 BBS2Q9BXC9 721 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 EPS15L1Q9UBC2 864 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 SLC25A13Q9UJS0 675 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 DHRS7Q9Y394 339 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 CCDC78A2IDD5 438 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 SCAMP3O14828 347 aaKnown RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 LSM1O15116 133 aaKnown RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 HNRNPRO43390 633 aaKnown RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 IPO13O94829 963 aaKnown RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 PIRTP0C851 137 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 HNRNPLP14866 589 aaKnown RBP eCLIP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 PTDSS1P48651 473 aaKnown RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 KPNA2P52292 529 aaKnown RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 HK3P52790 923 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 ATP6V0D1P61421 351 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 HERVK_113P63132 956 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 PRAMEP78395 509 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 PCDH1Q08174 1060 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 ITGA9Q13797 1035 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 EIF4HQ15056 248 aaKnown RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 PDGFRLQ15198 375 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 CCDC92Q53HC0 331 aaPredicted RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 UNC50Q53HI1 259 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 C9orf64Q5T6V5 341 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 SBSNQ6UWP8 590 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 CYP2U1Q7Z449 544 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 NANOGNBQ7Z5D8 188 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 TREML1Q86YW5 311 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 SPNS2Q8IVW8 549 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 NXPE3Q969Y0 559 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 FUBP1Q96AE4 644 aaKnown RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 ATXN7L3BQ96GX2 97 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 COQ10AQ96MF6 247 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 TRMOQ9BU70 441 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 CCDC28BQ9BUN5 200 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 ERVK-6Q9BXR3 956 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 PLK2Q9NYY3 685 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 RABL2AQ9UBK7 228 aaPredicted RBP7.92□□□□□ -1.14
COL21A1-212ENST00000535941 PCDHB9Q9Y5E1 797 aa7.92□□□□□ -1.14
COL21A1-212ENST00000535941 PRRT4C9JH25 899 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms