RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 KRT9P35527 623 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 CSRP3P50461 194 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 KIAA1644Q3SXP7 199 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 FFAR4Q5NUL3 377 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 SH2D5Q6ZV89 423 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 LRRTM4Q86VH4 590 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 LONP2Q86WA8 852 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 DNAAF4Q8WXU2 420 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 VGLL1Q99990 258 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 KIF9Q9HAQ2 790 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 PPP1R14DQ9NXH3 145 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 BARHL2Q9NY43 387 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 PYGO1Q9Y3Y4 419 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 DISP3Q9P2K9 1392 aa4.1□□□□□ -1.75
VBP1-203ENST00000535916 A0A0G2JNG1 304 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 LRRC53A6NM62 1247 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 EIF3FO00303 357 aaPredicted RBP4.09□□□□□ -1.75
VBP1-203ENST00000535916 WISP2O76076 250 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 IGHV4-38-2P0DP08 117 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 UBA1P22314 1058 aaKnown RBP4.09□□□□□ -1.75
VBP1-203ENST00000535916 MRPS5P82675 430 aaKnown RBP4.09□□□□□ -1.75
VBP1-203ENST00000535916 GALNT2Q10471 571 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 TUBB2AQ13885 445 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 KIR2DS5Q14953 304 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 ZNF239Q16600 458 aaKnown RBP4.09□□□□□ -1.75
VBP1-203ENST00000535916 MFSD6Q6ZSS7 791 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 Q75L30 129 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 NOL8Q76FK4 1167 aaKnown RBP4.09□□□□□ -1.75
VBP1-203ENST00000535916 ANKRD52Q8NB46 1076 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 FAM222BQ8WU58 562 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 RRNAD1Q96FB5 475 aaKnown RBP4.09□□□□□ -1.75
VBP1-203ENST00000535916 APOPT1Q96IL0 206 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 TUBB2BQ9BVA1 445 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 BRF2Q9HAW0 419 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 RPS10P5Q9NQ39 176 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 ASAH2Q9NR71 780 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 KCND2Q9NZV8 630 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 TMEM181Q9P2C4 612 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 KCNJ14Q9UNX9 436 aa4.09□□□□□ -1.75
VBP1-203ENST00000535916 TSPAN4O14817 238 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 SLC22A2O15244 555 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 HNRNPA1P09651 372 aaKnown RBP eCLIP4.08□□□□□ -1.76
VBP1-203ENST00000535916 IL7RP16871 459 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 GNAZP19086 355 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 PPFIA1Q13136 1202 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 TBX2Q13207 712 aaPredicted RBP4.08□□□□□ -1.76
VBP1-203ENST00000535916 CXorf66Q5JRM2 361 aaPredicted RBP4.08□□□□□ -1.76
VBP1-203ENST00000535916 NAA35Q5VZE5 725 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 OR14L1PQ8NHC6 308 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 UTP15Q8TED0 518 aaKnown RBP4.08□□□□□ -1.76
VBP1-203ENST00000535916 MOCOSQ96EN8 888 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 SMC6Q96SB8 1091 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 CABLES2Q9BTV7 478 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 STK36Q9NRP7 1315 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 SLC7A10Q9NS82 523 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 SARDHQ9UL12 918 aa4.08□□□□□ -1.76
VBP1-203ENST00000535916 FLT1P17948 1338 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 IGKV6D-41A0A0C4DH26 115 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 ANKRD66B4E2M5 251 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 H0YIN7 160 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 ABCD1P33897 745 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 CPOXP36551 454 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 GPR68Q15743 365 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 GSTA3Q16772 222 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 TCTE1Q5JU00 501 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 FAAP20Q6NZ36 180 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 PACS1Q6VY07 963 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 RDM1Q8NG50 284 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 GTF3C6Q969F1 213 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 TRIM63Q969Q1 353 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 PRMT6Q96LA8 375 aaPredicted RBP4.07□□□□□ -1.76
VBP1-203ENST00000535916 HARBI1Q96MB7 349 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 SIX2Q9NPC8 291 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 SLC38A7Q9NVC3 462 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 DNAJB4Q9UDY4 337 aa4.07□□□□□ -1.76
VBP1-203ENST00000535916 FAM237AA0A1B0GTK4 181 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 MAGEB17A8MXT2 336 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 PLOD2O00469 737 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 KCNK5O95279 499 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 LDHAP00338 332 aaKnown RBP4.06□□□□□ -1.76
VBP1-203ENST00000535916 TFAP2AP05549 437 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 ZNF182P17025 639 aaPredicted RBP4.06□□□□□ -1.76
VBP1-203ENST00000535916 PIP4K2AP48426 406 aaPredicted RBP4.06□□□□□ -1.76
VBP1-203ENST00000535916 NEXNQ0ZGT2 675 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 OS9Q13438 667 aaPredicted RBP4.06□□□□□ -1.76
VBP1-203ENST00000535916 ADAMTSL4-AS1Q5T5F5 129 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 LCN10Q6JVE6 187 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 CERS3Q8IU89 383 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 GBGT1Q8N5D6 347 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 MAELQ96JY0 434 aaKnown RBP4.06□□□□□ -1.76
VBP1-203ENST00000535916 ARPC5LQ9BPX5 153 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 RBM4BQ9BQ04 359 aaKnown RBP4.06□□□□□ -1.76
VBP1-203ENST00000535916 SLX1AQ9BQ83 275 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 POLR3GLQ9BT43 218 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 MCRIP2Q9BUT9 160 aaKnown RBP4.06□□□□□ -1.76
VBP1-203ENST00000535916 VEZTQ9HBM0 779 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 APOBEC3GQ9HC16 384 aaKnown RBP4.06□□□□□ -1.76
VBP1-203ENST00000535916 STK39Q9UEW8 545 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 OR14J1Q9UGF5 321 aa4.06□□□□□ -1.76
VBP1-203ENST00000535916 HAO1Q9UJM8 370 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms