RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 ZBTB11O95625 1053 aaPredicted RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 IL33O95760 270 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 BCL10O95999 233 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 ALDH2P05091 517 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 PFKMP08237 780 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 KRT3P12035 628 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 OSMP13725 252 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 IL10P22301 178 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 DNAJB1P25685 340 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 PIK3R1P27986 724 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 SLC7A1P30825 629 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 YWHABP31946 246 aaKnown RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 SERPINB10P48595 397 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 ENTPD1P49961 510 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 KPNA2P52292 529 aaKnown RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 SLC16A1P53985 500 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 MLLT6P55198 1093 aaPredicted RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 NME5P56597 212 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 YWHAZP63104 245 aaKnown RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 MRPS5P82675 430 aaKnown RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 CAP1Q01518 475 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 GRM1Q13255 1194 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 TUBB3Q13509 450 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 PTK2BQ14289 1009 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 NOMO1Q15155 1222 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 BCL2A1Q16548 175 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 DEFB115Q30KQ5 88 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 ZACNQ401N2 412 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 XKR9Q5GH70 373 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 PIGGQ5H8A4 983 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 XP32Q5T750 250 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 DEPDC1Q5TB30 811 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 N4BP2L1Q5TBK1 243 aaPredicted RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 GRTP1Q5TC63 336 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 ANKRD22Q5VYY1 191 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 MBNL2Q5VZF2 373 aaKnown RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 SEL1L3Q68CR1 1132 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 PRMT9Q6P2P2 845 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 UNQ6494/PRO21346Q6UXR6 183 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 C15orf39Q6ZRI6 1047 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 CARM1Q86X55 608 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 DSELQ8IZU8 1212 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 CPXCR1Q8N123 301 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 DAW1Q8N136 415 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 CENPSQ8N2Z9 138 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 MIER2Q8N344 545 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 ANKFN1Q8N957 763 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 GLIS1Q8NBF1 620 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 LEMD2Q8NC56 503 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 TFB1MQ8WVM0 346 aaKnown RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 KBTBD7Q8WVZ9 684 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 ZNF606Q8WXB4 792 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 SOCS4Q8WXH5 440 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 RTP4Q96DX8 246 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 DUS3LQ96G46 650 aaKnown RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 FAR2Q96K12 515 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 CAPNS2Q96L46 248 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 WDR92Q96MX6 357 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 CDRT15Q96T59 188 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 RMDN3Q96TC7 470 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 P2RX7Q99572 595 aaKnown RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 PTPN18Q99952 460 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 SLX1AQ9BQ83 275 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 EBF4Q9BQW3 602 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 C9orf16Q9BUW7 83 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 MECRQ9BV79 373 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 KIFC3Q9BVG8 833 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 PITHD1Q9GZP4 211 aaPredicted RBP6.59□□□□□ -1.35
USP28-202ENST00000535607 SNX25Q9H3E2 840 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 PDZD7Q9H5P4 517 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 WDR41Q9HAD4 459 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 KLHL11Q9NVR0 708 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 NSMCE4AQ9NXX6 385 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 SAGE1Q9NXZ1 904 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 COPG2Q9UBF2 871 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 PRSS50Q9UI38 385 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 CDC42EP3Q9UKI2 254 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 CDYLQ9Y232 598 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 ANKRD6Q9Y2G4 727 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 TMEM98Q9Y2Y6 226 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 PLXNB2O15031 1838 aa6.59□□□□□ -1.35
USP28-202ENST00000535607 LCTP09848 1927 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 A0A0A6YYJ9 748 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 HEATR9A2RTY3 570 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 SAC3D1A6NKF1 404 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 TRIM64CA6NLI5 447 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 BOLA2-SMG1P6H3BVE0 249 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 PSMD12O00232 456 aaPredicted RBP6.58□□□□□ -1.36
USP28-202ENST00000535607 APOL1O14791 398 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 HDAC3O15379 428 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 PAPSS1O43252 624 aaPredicted RBP6.58□□□□□ -1.36
USP28-202ENST00000535607 CA12O43570 354 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 BANF1O75531 89 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 DNAJB5O75953 348 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 TMEM63AO94886 807 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 FGF3P11487 239 aaPredicted RBP6.58□□□□□ -1.36
USP28-202ENST00000535607 ZNF28P17035 718 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 PTPN2P17706 415 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 CCNA2P20248 432 aa6.58□□□□□ -1.36
USP28-202ENST00000535607 DCKP27707 260 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms