RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 CCDC78A2IDD5 438 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 HEATR9A2RTY3 570 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 EME2A4GXA9 379 aaPredicted RBP22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 AGAP14A8MT82 685 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 HYAL3O43820 417 aaPredicted RBP22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 NOBOXO60393 691 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 CDK14O94921 469 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 ECEL1O95672 775 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 ADRA1DP25100 572 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 RPIAP49247 311 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 ARSDP51689 593 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 TERF1P54274 439 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 TMEM115Q12893 351 aaPredicted RBP22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 ANKRD22Q5VYY1 191 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 SLC30A9Q6PML9 568 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 DHRS13Q6UX07 377 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 CPT1BQ92523 772 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 SLCO2A1Q92959 643 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 CDKN2AIPNLQ96HQ2 116 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 DPEP2Q9H4A9 486 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 RIMKLBQ9ULI2 386 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 PADI4Q9UM07 663 aa22.45■■□□□ 1.18
SFSWAP-204ENST00000535399 B4DGG1 531 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 ACP5P13686 325 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 ITGALP20701 1170 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 MC4RP32245 332 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 ACTR1BP42025 376 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 PAFAH1B1P43034 410 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 PTGIRP43119 386 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 SESN2P58004 480 aaPredicted RBP22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 ACTR1AP61163 376 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 LAMB3Q13751 1172 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 SKIDA1Q1XH10 827 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 TSTD2Q5T7W7 516 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 LRRC8BQ6P9F7 803 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 CRTC3Q6UUV7 619 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 CHST15Q7LFX5 561 aaPredicted RBP22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 EFL1Q7Z2Z2 1120 aaKnown RBP22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 ZNF547Q8IVP9 402 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 OR13J1Q8NGT2 312 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 IFI44Q8TCB0 444 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 SLC2A6Q9UGQ3 507 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 TCAF1Q9Y4C2 921 aa22.44■■□□□ 1.18
SFSWAP-204ENST00000535399 CPED1A4D0V7 1026 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 TMEM63AO94886 807 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 GP1BAP07359 652 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 CDK4P11802 303 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 SHC2P98077 582 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 SNX20Q7Z614 316 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 LRRTM4Q86VH4 590 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 C17orf82Q86X59 251 aaPredicted RBP22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 RASGEF1AQ8N9B8 481 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 ZDHHC1Q8WTX9 485 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 ZNF778Q96MU6 729 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 FAM96AQ9H5X1 160 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 SLC23A2Q9UGH3 650 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 KCNK6Q9Y257 313 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 SLC30A1Q9Y6M5 507 aa22.43■■□□□ 1.18
SFSWAP-204ENST00000535399 TRBV5-4A0A0C4DH59 114 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 AP3B1O00203 1094 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 KMOO15229 486 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 SPINK2P20155 84 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 NPY2RP49146 381 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 CDKN1CP49918 316 aaPredicted RBP22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 CTSCP53634 463 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 CRADDP78560 199 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 ACVR1Q04771 509 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 PTK6Q13882 451 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 HLTFQ14527 1009 aaKnown RBP eCLIP22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 PPP1R7Q15435 360 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 SMAD1Q15797 465 aaKnown RBP22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 GPR33Q49SQ1 333 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 C14orf28Q4W4Y0 310 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 PCID2Q5JVF3 399 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 PERM1Q5SV97 790 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 KLHL7Q8IXQ5 586 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 NXPE1Q8N323 547 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 NAT6Q93015 286 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 ULK4Q96C45 1275 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 ZCCHC2Q9C0B9 1178 aaKnown RBP22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 CRLS1Q9UJA2 301 aa22.42■■□□□ 1.18
SFSWAP-204ENST00000535399 CCDC162PA2VCL2 907 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 EML2O95834 649 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 PRSS56P0CW18 603 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 MGAT1P26572 445 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 CLCNKAP51800 687 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 B4GALNT1Q00973 533 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 E2F1Q01094 437 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 GTF2H3Q13889 308 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 NLRP9Q7RTR0 991 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 TMPRSS7Q7RTY8 843 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 C11orf96Q7Z7L8 435 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 CAND1Q86VP6 1230 aaKnown RBP22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 PIANPQ8IYJ0 282 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 MCUQ8NE86 351 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 PPHLN1Q8NEY8 458 aaKnown RBP22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 PEX13Q92968 403 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 CCDC97Q96F63 343 aaPredicted RBP22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 TTC25Q96NG3 672 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms