RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CD82P27701 267 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 ATP5OP48047 213 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 MARCKSL1P49006 195 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 ZNF75DP51815 510 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 NFATC2Q13469 925 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 KIR2DS5Q14953 304 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 TGIF1Q15583 401 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 PPP2R5EQ16537 467 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 ADGRG6Q86SQ4 1221 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 ZFAND4Q86XD8 727 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 ZNF567Q8N184 647 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 SLC25A41Q8N5S1 370 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 AVL9Q8NBF6 648 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 AGBL5Q8NDL9 886 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 GDAP1Q8TB36 358 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 SNRNP27Q8WVK2 155 aaKnown RBP15.26■□□□□ 0.03
CPSF1-211ENST00000533492 KRT35Q92764 455 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 MRFAP1L1Q96HT8 127 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 FCRL5Q96RD9 977 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 TAAR9Q96RI9 348 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 FERMT1Q9BQL6 677 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.26■□□□□ 0.03
CPSF1-211ENST00000533492 TRABDQ9H4I3 376 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 KLC4Q9NSK0 619 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 TRHDEQ9UKU6 1024 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 SPO11Q9Y5K1 396 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 LOC285095A0A1B0GVY8 99 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 C9orf172C9J069 976 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 F5H423 210 aaPredicted RBP15.25■□□□□ 0.03
CPSF1-211ENST00000533492 KMOO15229 486 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 VEGFDO43915 354 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 CDK14O94921 469 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 NDUFA10O95299 355 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 THRAP10827 490 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 CSF2RBP32927 897 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 HMGCLP35914 325 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 MAPK9P45984 424 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 COPS2P61201 443 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 CFHR1Q03591 330 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 XRCC4Q13426 336 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 INSCQ1MX18 579 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 SIRPB2Q5JXA9 342 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 MANEAQ5SRI9 462 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.25■□□□□ 0.03
CPSF1-211ENST00000533492 ZDHHC20Q5W0Z9 365 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 CRTC3Q6UUV7 619 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 KDELC1Q6UW63 502 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 BBS12Q6ZW61 710 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 LRRTM4Q86VH4 590 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 IPMKQ8NFU5 416 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 NCSTNQ92542 709 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 WBP1Q96G27 269 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 TTC25Q96NG3 672 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 QKIQ96PU8 341 aaKnown RBP eCLIP15.25■□□□□ 0.03
CPSF1-211ENST00000533492 PLEKHG4BQ96PX9 1271 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 B3GNT4Q9C0J1 378 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 PRDM8Q9NQV8 689 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 HACD3Q9P035 362 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 FOXJ2Q9P0K8 574 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 CPNE7Q9UBL6 633 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 RSPH14Q9UHP6 348 aa15.25■□□□□ 0.03
CPSF1-211ENST00000533492 BAHCC1Q9P281 2608 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 MACROD2A1Z1Q3 448 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 SOWAHDA6NJG2 315 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 APOC4-APOC2K7ER74 178 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 CHUKO15111 745 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 MTX2O75431 263 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 APOC2P02655 101 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 FGF3P11487 239 aaPredicted RBP15.24■□□□□ 0.03
CPSF1-211ENST00000533492 ZNF7P17097 686 aaPredicted RBP15.24■□□□□ 0.03
CPSF1-211ENST00000533492 CTNNA2P26232 953 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 CETN2P41208 172 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 CLCNKAP51800 687 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 MPP3Q13368 585 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 GTF2H3Q13889 308 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 PLA2G4EQ3MJ16 856 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 SNAP47Q5SQN1 464 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 KIAA1614Q5VZ46 1190 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 FAM129CQ86XR2 697 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 TRIM48Q8IWZ4 208 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 BLOC1S5Q8TDH9 187 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 MRGPRX2Q96LB1 330 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 FSD1LQ9BXM9 530 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 RBSNQ9H1K0 784 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 SLC39A1Q9NY26 324 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.24■□□□□ 0.03
CPSF1-211ENST00000533492 TMEM9Q9P0T7 183 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 DNAJC16Q9Y2G8 782 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 PCDHA3Q9Y5H8 950 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 ADGRG1Q9Y653 693 aa15.24■□□□□ 0.03
CPSF1-211ENST00000533492 A6NCN8 305 aa15.23■□□□□ 0.03
CPSF1-211ENST00000533492 EFCAB7A8K855 629 aa15.23■□□□□ 0.03
CPSF1-211ENST00000533492 A8MU76 341 aa15.23■□□□□ 0.03
CPSF1-211ENST00000533492 PDZK1P1A8MUH7 402 aa15.23■□□□□ 0.03
CPSF1-211ENST00000533492 STMND1H3BQB6 276 aa15.23■□□□□ 0.03
CPSF1-211ENST00000533492 EFSO43281 561 aa15.23■□□□□ 0.03
CPSF1-211ENST00000533492 HLA-DPA1P20036 260 aa15.23■□□□□ 0.03
CPSF1-211ENST00000533492 RBL1P28749 1068 aa15.23■□□□□ 0.03
CPSF1-211ENST00000533492 CTNNA1P35221 906 aaKnown RBP15.23■□□□□ 0.03
CPSF1-211ENST00000533492 CHRNA4P43681 627 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms