RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 NFATC4Q14934 902 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 TRADDQ15628 312 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 TRIP13Q15645 432 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 C1QL3Q5VWW1 255 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 DUPD1Q68J44 220 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 TFAP2DQ7Z6R9 452 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 PRUNE1Q86TP1 453 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 CDKL3Q8IVW4 592 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 PLPP6Q8IY26 295 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 IFT20Q8IY31 132 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 NPWQ8N729 165 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 FAM71DQ8N9W8 422 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 TP53I13Q8NBR0 393 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 CXorf40AQ8TE69 158 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 CASKIN2Q8WXE0 1202 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 STARD8Q92502 1023 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 CELF6Q96J87 481 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 OLFM3Q96PB7 478 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 TRIM31Q9BZY9 425 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 SLC39A8Q9C0K1 460 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 TRIT1Q9H3H1 467 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 DPEP2Q9H4A9 486 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 CASS4Q9NQ75 786 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 NDFIP2Q9NV92 336 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 TMEM248Q9NWD8 314 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 DONSONQ9NYP3 566 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 HECAQ9UBI9 543 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 SNX24Q9Y343 169 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 UTP11Q9Y3A2 253 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 NEU2Q9Y3R4 380 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 KCNMB2Q9Y691 235 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 DGKBQ9Y6T7 804 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 CFAP69A5D8W1 941 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 ZSCAN5CA6NGD5 496 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 B4DGG1 531 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 B4E171 279 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 K7EM74 188 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 AREL1O15033 823 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 CLDN1O95832 211 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 IFNB1P01574 187 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 TUBBP07437 444 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 MX2P20592 715 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 ALDH4A1P30038 563 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 SERPINB6P35237 376 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 TSPAN7P41732 249 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 NDST2P52849 883 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 LIMK2P53671 638 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 DRG2P55039 364 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 OR1D5P58170 312 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 VSNL1P62760 191 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 ABHD18Q0P651 414 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 GALNT2Q10471 571 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 PTK6Q13882 451 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 LRRC14Q15048 493 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 IRF4Q15306 451 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 KRTAP21-3Q3LHN1 58 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 AFMIDQ63HM1 303 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 C16orf46Q6P387 395 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 ZNF783Q6ZMS7 281 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 TTC7BQ86TV6 843 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 ARHGAP12Q8IWW6 846 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 SLC34A3Q8N130 599 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 UMODL1-AS1Q8N2C9 162 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 RYBPQ8N488 228 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 GLIS1Q8NBF1 620 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 CCNYQ8ND76 341 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 OR4D9Q8NGE8 314 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 TFB1MQ8WVM0 346 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 IFT81Q8WYA0 676 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 ISG20Q96AZ6 181 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 WDR92Q96MX6 357 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 QKIQ96PU8 341 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 NUDT22Q9BRQ3 303 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 APOOQ9BUR5 198 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 OSBPL1AQ9BXW6 950 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 RAB17Q9H0T7 212 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 DPH5Q9H2P9 285 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 RETREG1Q9H6L5 497 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 NOL6Q9H6R4 1146 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 ZNF212Q9UDV6 495 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 RAB21Q9UL25 225 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 PCDHB3Q9Y5E6 796 aa11.26□□□□□ -0.61
TRAPPC4-213ENST00000533149 FBN2P35556 2912 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 LOC101059948A0A1B0GTJ6 334 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 ESYT3A0FGR9 886 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 WIPF3A6NGB9 483 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 RHPN2P1A8MT19 583 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 DFFAO00273 331 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 PPP1R12AO14974 1030 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 KCNN4O15554 427 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 OR1E1P30953 314 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 RPL22P35268 128 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 ADCY8P40145 1251 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 MAPKAPK2P49137 400 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 CARSP49589 748 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 VPS41P49754 854 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 PAPOLAP51003 745 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 GDF10P55107 478 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 AP1B1Q10567 949 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 PRKD1Q15139 912 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms