RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 HACD3Q9P035 362 aa15.33■□□□□ 0.04
CTSB-225ENST00000532409 PPP2R2CQ9Y2T4 447 aa15.33■□□□□ 0.04
CTSB-225ENST00000532409 AAR2Q9Y312 384 aaKnown RBP15.33■□□□□ 0.04
CTSB-225ENST00000532409 ITPR1Q14643 2758 aa15.33■□□□□ 0.04
CTSB-225ENST00000532409 GLYATL1P3A0A0U1RQE8 302 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 A6NCN8 305 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 RHPN2P1A8MT19 583 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 CCL22O00626 93 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 LIASO43766 372 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 ETS1P14921 441 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 TPH1P17752 444 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 ALDH4A1P30038 563 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 LRP8Q14114 963 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 OASLQ15646 514 aaKnown RBP15.32■□□□□ 0.04
CTSB-225ENST00000532409 NKAIN2Q5VXU1 208 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 KCTD11Q693B1 232 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 PDPK2PQ6A1A2 396 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 ZNF662Q6ZS27 426 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 USP53Q70EK8 1073 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 ZNF438Q7Z4V0 828 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 KLHDC8BQ8IXV7 354 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 OR4K2Q8NGD2 314 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 OR6C4Q8NGE1 309 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 GDAP1Q8TB36 358 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 RMI1Q9H9A7 625 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 KLC4Q9NSK0 619 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 FKBPLQ9UIM3 349 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 DNAJC16Q9Y2G8 782 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 PKP3Q9Y446 797 aa15.32■□□□□ 0.04
CTSB-225ENST00000532409 CHUKO15111 745 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 STX7O15400 261 aaKnown RBP15.31■□□□□ 0.04
CTSB-225ENST00000532409 CDK14O94921 469 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 HGFP14210 728 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 LSSP48449 732 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 TMPRSS15P98073 1019 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 BIRC2Q13490 618 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 SIX1Q15475 284 aaPredicted RBP15.31■□□□□ 0.04
CTSB-225ENST00000532409 PARP6Q2NL67 630 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 GLIS1Q8NBF1 620 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 OR13C4Q8NGS5 318 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 WDR48Q8TAF3 677 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 HNRNPLLQ8WVV9 542 aaKnown RBP15.31■□□□□ 0.04
CTSB-225ENST00000532409 CCDC97Q96F63 343 aaPredicted RBP15.31■□□□□ 0.04
CTSB-225ENST00000532409 CRELD1Q96HD1 420 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 PRR11Q96HE9 360 aaPredicted RBP15.31■□□□□ 0.04
CTSB-225ENST00000532409 ALS2CR12Q96Q35 445 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 VPS35Q96QK1 796 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 NUDT22Q9BRQ3 303 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 OSGEPL1Q9H4B0 414 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 POLR1BQ9H9Y6 1135 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 EPB41L5Q9HCM4 733 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 PRDM8Q9NQV8 689 aa15.31■□□□□ 0.04
CTSB-225ENST00000532409 ZNF106Q9H2Y7 1883 aaKnown RBP15.31■□□□□ 0.04
CTSB-225ENST00000532409 PRAMEF1O95521 474 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 IFNB1P01574 187 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 PNLIPP16233 465 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 LPOP22079 712 aaPredicted RBP15.3■□□□□ 0.04
CTSB-225ENST00000532409 CXCR5P32302 372 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 CSF2RBP32927 897 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 ZNF140P52738 457 aaPredicted RBP15.3■□□□□ 0.04
CTSB-225ENST00000532409 CTSCP53634 463 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 TMEM115Q12893 351 aaPredicted RBP15.3■□□□□ 0.04
CTSB-225ENST00000532409 NR1D2Q14995 579 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 TAF1AQ15573 450 aaPredicted RBP15.3■□□□□ 0.04
CTSB-225ENST00000532409 SEPT7Q16181 437 aaKnown RBP15.3■□□□□ 0.04
CTSB-225ENST00000532409 TBC1D25Q3MII6 688 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 GPRC6AQ5T6X5 926 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 SFRP1Q8N474 314 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 RASGEF1AQ8N9B8 481 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 NBEAQ8NFP9 2946 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 RTP4Q96DX8 246 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 SEMA6CQ9H3T2 930 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 ASCL3Q9NQ33 180 aa15.3■□□□□ 0.04
CTSB-225ENST00000532409 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.3■□□□□ 0.043e-10■■■■□ 24.6
CTSB-225ENST00000532409 SCHIP1Q9P0W5 487 aaPredicted RBP15.3■□□□□ 0.04
CTSB-225ENST00000532409 PRAMEF33A0A0G2JMD5 474 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 CCDC78A2IDD5 438 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 GOLGA6L3A6NEY3 463 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 LDB2O43679 373 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 ZSCAN5DPP0CG00 497 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 HOXB3P14651 431 aaPredicted RBP15.29■□□□□ 0.04
CTSB-225ENST00000532409 ZNF7P17097 686 aaPredicted RBP15.29■□□□□ 0.04
CTSB-225ENST00000532409 MPSTP25325 297 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 ITPKBP27987 946 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 CD1CP29017 333 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 INHBCP55103 352 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 CFHR1Q03591 330 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 NFATC2Q13469 925 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 INSCQ1MX18 579 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 MAP9Q49MG5 647 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 IYDQ6PHW0 289 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 ZNF574Q6ZN55 896 aaPredicted RBP15.29■□□□□ 0.04
CTSB-225ENST00000532409 C11orf96Q7Z7L8 435 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 LRRTM4Q86VH4 590 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 TRAPPC5Q8IUR0 188 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 SLITRK4Q8IW52 837 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 BRSK1Q8TDC3 778 aa15.29■□□□□ 0.04
CTSB-225ENST00000532409 NAF1Q96HR8 494 aaKnown RBP15.29■□□□□ 0.04
CTSB-225ENST00000532409 DNAJC1Q96KC8 554 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms