RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 ACRV1P26436 265 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 ARRB1P49407 418 aaPredicted RBP15.87■□□□□ 0.13
BRK1-201ENST00000530758 CDKN1CP49918 316 aaPredicted RBP15.87■□□□□ 0.13
BRK1-201ENST00000530758 LIMK1P53667 647 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 HNRNPKP61978 463 aaKnown RBP eCLIP15.87■□□□□ 0.13
BRK1-201ENST00000530758 PPARDQ03181 441 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 PDIA2Q13087 525 aaKnown RBP15.87■□□□□ 0.13
BRK1-201ENST00000530758 SLC14A1Q13336 389 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 ITIH4Q14624 930 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 SPANXN3Q5MJ09 141 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 LYPLAL1Q5VWZ2 237 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 PSAPL1Q6NUJ1 521 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 CES3Q6UWW8 571 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 CYS1Q717R9 158 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 KANSL1Q7Z3B3 1105 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 RELL1Q8IUW5 271 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 LMNTD2Q8IXW0 634 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 PIANPQ8IYJ0 282 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 SDR16C5Q8N3Y7 309 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 MINDY1Q8N5J2 469 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 OR6P1Q8NGX9 317 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 OR1E3Q8WZA6 343 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 TRIM56Q9BRZ2 755 aaKnown RBP15.87■□□□□ 0.13
BRK1-201ENST00000530758 TSPYL1Q9H0U9 437 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 TRNAU1APQ9NX07 287 aaKnown RBP15.87■□□□□ 0.13
BRK1-201ENST00000530758 ATXN10Q9UBB4 475 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 KLQ9UEF7 1012 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 GPR34Q9UPC5 381 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 TMEM98Q9Y2Y6 226 aa15.87■□□□□ 0.13
BRK1-201ENST00000530758 PRSS38A1L453 326 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 OR51F1A6NGY5 319 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 CD3EAPO15446 510 aaKnown RBP15.86■□□□□ 0.13
BRK1-201ENST00000530758 GPR39O43194 453 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 BANF1O75531 89 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 VAPBO95292 243 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 POLD2P49005 469 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 CARSP49589 748 aaKnown RBP15.86■□□□□ 0.13
BRK1-201ENST00000530758 KHDC1Q4VXA5 237 aaKnown RBP15.86■□□□□ 0.13
BRK1-201ENST00000530758 PYCR3Q53H96 274 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 ZRANB3Q5FWF4 1079 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 PRAMEF14Q5SWL7 426 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 KCTD16Q68DU8 428 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 TRIM74Q86UV6 250 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 SERPINA9Q86WD7 417 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 PHACTR4Q8IZ21 702 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 SAP25Q8TEE9 199 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 TSACCQ96A04 125 aaPredicted RBP15.86■□□□□ 0.13
BRK1-201ENST00000530758 ZNF669Q96BR6 464 aaPredicted RBP15.86■□□□□ 0.13
BRK1-201ENST00000530758 TCF12Q99081 682 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 FAM96AQ9H5X1 160 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 IL21RQ9HBE5 538 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 TMEM9BQ9NQ34 198 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 MRPL40Q9NQ50 206 aaKnown RBP15.86■□□□□ 0.13
BRK1-201ENST00000530758 DNAJC28Q9NX36 388 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 ZDHHC3Q9NYG2 299 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 ZC3H7BQ9UGR2 993 aaKnown RBP15.86■□□□□ 0.13
BRK1-201ENST00000530758 CRLS1Q9UJA2 301 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 DNMT3AQ9Y6K1 912 aaPredicted RBP15.86■□□□□ 0.13
BRK1-201ENST00000530758 CSNK1G3Q9Y6M4 447 aa15.86■□□□□ 0.13
BRK1-201ENST00000530758 ARID1BQ8NFD5 2236 aaPredicted RBP15.86■□□□□ 0.13
BRK1-201ENST00000530758 H3BM21 787 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 PIAS2O75928 621 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 CDK14O94921 469 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 RHOXF2BP0C7M4 288 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 PRSS56P0CW18 603 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 ZNF8P17098 575 aaPredicted RBP15.85■□□□□ 0.13
BRK1-201ENST00000530758 JUNDP17535 347 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 EPHA8P29322 1005 aaPredicted RBP15.85■□□□□ 0.13
BRK1-201ENST00000530758 ATXN3P54252 364 aaPredicted RBP15.85■□□□□ 0.13
BRK1-201ENST00000530758 ARHGAP8P85298 464 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 B4GALNT1Q00973 533 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 PUM1Q14671 1186 aaKnown RBP eCLIP15.85■□□□□ 0.13
BRK1-201ENST00000530758 CRYMQ14894 314 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 LONRF1Q17RB8 773 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 FASTKD1Q53R41 847 aaKnown RBP15.85■□□□□ 0.13
BRK1-201ENST00000530758 PACS1Q6VY07 963 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 UNC5AQ6ZN44 842 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 CEP128Q6ZU80 1094 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 ZBED8Q8IZ13 594 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.85■□□□□ 0.13
BRK1-201ENST00000530758 FBXO36Q8NEA4 188 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 PDXPQ96GD0 296 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 ZNF514Q96K75 400 aaPredicted RBP15.85■□□□□ 0.13
BRK1-201ENST00000530758 COPS8Q99627 209 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 RHOXF2Q9BQY4 288 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 EDEM2Q9BV94 578 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 GTPBP2Q9BX10 602 aaKnown RBP15.85■□□□□ 0.13
BRK1-201ENST00000530758 ZCCHC2Q9C0B9 1178 aaKnown RBP15.85■□□□□ 0.13
BRK1-201ENST00000530758 CYP4F12Q9HCS2 524 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 TM7SF3Q9NS93 570 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 CATSPERZQ9NTU4 200 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 MOCS1Q9NZB8 636 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 MTRF1LQ9UGC7 380 aaKnown RBP15.85■□□□□ 0.13
BRK1-201ENST00000530758 SUFUQ9UMX1 484 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 NCOR2Q9Y618 2525 aa15.85■□□□□ 0.13
BRK1-201ENST00000530758 ASCC3Q8N3C0 2202 aaKnown RBP15.84■□□□□ 0.13
BRK1-201ENST00000530758 SGTAO43765 313 aa15.84■□□□□ 0.13
BRK1-201ENST00000530758 KCNJ13O60928 360 aa15.84■□□□□ 0.13
BRK1-201ENST00000530758 ASMTLO95671 621 aa15.84■□□□□ 0.13
BRK1-201ENST00000530758 GSTA2P09210 222 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms