RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 CD9P21926 228 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 ARF5P84085 180 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 FOXM1Q08050 763 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 TRAF2Q12933 501 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 BNIP2Q12982 314 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 RCAN2Q14206 197 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 PABPC1LQ4VXU2 614 aaKnown RBP20.21■□□□□ 0.83
SMIM3-201ENST00000526627 SCIMPQ6UWF3 145 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 ZBTB49Q6ZSB9 765 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 TSPEARQ8WU66 669 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 PPWD1Q96BP3 646 aaKnown RBP20.21■□□□□ 0.83
SMIM3-201ENST00000526627 PLEKHG4BQ96PX9 1271 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 TTPALQ9BTX7 342 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 BPIFA1Q9NP55 256 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 ACTR3BQ9P1U1 418 aa20.21■□□□□ 0.83
SMIM3-201ENST00000526627 A0A1W2PP18 115 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 A0A1W2PQ45 241 aaPredicted RBP20.2■□□□□ 0.82
SMIM3-201ENST00000526627 A0A1W2PQY0 241 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 ANKRD66B4E2M5 251 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 DLGAP1O14490 977 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 AKAP10O43572 662 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 VPS26AO75436 327 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 CRCPO75575 148 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 CORO1AP31146 461 aaKnown RBP20.2■□□□□ 0.82
SMIM3-201ENST00000526627 DYNC1I2Q13409 638 aaKnown RBP20.2■□□□□ 0.82
SMIM3-201ENST00000526627 CXorf57Q6NSI4 855 aaKnown RBP20.2■□□□□ 0.82
SMIM3-201ENST00000526627 TXNDC11Q6PKC3 985 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 EPHX4Q8IUS5 362 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 VPS33AQ96AX1 596 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 ZNF512Q96ME7 567 aaPredicted RBP20.2■□□□□ 0.82
SMIM3-201ENST00000526627 ACOX2Q99424 681 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 TMEM79Q9BSE2 394 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.2■□□□□ 0.82
SMIM3-201ENST00000526627 DHRS12A0PJE2 317 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 UROSP10746 265 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 UGT1A6P19224 532 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 GRIK2Q13002 908 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 ZNF177Q13360 481 aaPredicted RBP20.2■□□□□ 0.82
SMIM3-201ENST00000526627 PAGE3Q5JUK9 113 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 CHST9Q7L1S5 443 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 ADGRG5Q8IZF4 528 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 EFHBQ8N7U6 833 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 FBXO22Q8NEZ5 403 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 DDI1Q8WTU0 396 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 LINGO1Q96FE5 620 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 HGH1Q9BTY7 390 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 NACA2Q9H009 215 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 OLAHQ9NV23 265 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 PTTG2Q9NZH5 202 aa20.2■□□□□ 0.82
SMIM3-201ENST00000526627 TRMT6Q9UJA5 497 aaKnown RBP20.2■□□□□ 0.82
SMIM3-201ENST00000526627 ARHGAP10A1A4S6 786 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 E2F3O00716 465 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 ARPC2O15144 300 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 MLYCDO95822 493 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 OXTRP30559 389 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 TTPAP49638 278 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 UFM1P61960 85 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 ELAVL2Q12926 359 aaKnown RBP20.19■□□□□ 0.82
SMIM3-201ENST00000526627 RBBP5Q15291 538 aaKnown RBP20.19■□□□□ 0.82
SMIM3-201ENST00000526627 TBCELQ5QJ74 424 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 HECTD3Q5T447 861 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 CPNE9Q8IYJ1 553 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 CRIPAKQ8N1N5 446 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 ANKRD60Q9BZ19 345 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 TRIM15Q9C019 465 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 BRINP2Q9C0B6 783 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 CWH43Q9H720 699 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 EIF2B4Q9UI10 523 aaKnown RBP20.19■□□□□ 0.82
SMIM3-201ENST00000526627 AURKCQ9UQB9 309 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 VPS9D1Q9Y2B5 631 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 ANKRD12Q6UB98 2062 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 TSPAN3O60637 253 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 SELPP16109 830 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 NELFEP18615 380 aaKnown RBP20.19■□□□□ 0.82
SMIM3-201ENST00000526627 RPL17P18621 184 aaKnown RBP20.19■□□□□ 0.82
SMIM3-201ENST00000526627 CES1P23141 567 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 CLCN4P51793 760 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 NR1H2P55055 460 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 NAA20P61599 178 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 RABL3Q5HYI8 236 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 RNF219Q5W0B1 726 aaPredicted RBP20.19■□□□□ 0.82
SMIM3-201ENST00000526627 LINGO4Q6UY18 593 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 C16orf59Q7L2K0 433 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 GOLM1Q8NBJ4 401 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 GRIN3AQ8TCU5 1115 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 PLD4Q96BZ4 506 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 TRIM54Q9BYV2 358 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 AGPAT4Q9NRZ5 378 aa20.19■□□□□ 0.82
SMIM3-201ENST00000526627 A0A1B0GVM2 712 aa20.18■□□□□ 0.82
SMIM3-201ENST00000526627 SAC3D1A6NKF1 404 aa20.18■□□□□ 0.82
SMIM3-201ENST00000526627 H3BNH8 94 aa20.18■□□□□ 0.82
SMIM3-201ENST00000526627 GPR39O43194 453 aa20.18■□□□□ 0.82
SMIM3-201ENST00000526627 HNRNPRO43390 633 aaKnown RBP20.18■□□□□ 0.82
SMIM3-201ENST00000526627 SNAP91O60641 907 aa20.18■□□□□ 0.82
SMIM3-201ENST00000526627 H6PDO95479 791 aa20.18■□□□□ 0.82
SMIM3-201ENST00000526627 HMGA1P17096 107 aaKnown RBP20.18■□□□□ 0.82
SMIM3-201ENST00000526627 IL12AP29459 219 aa20.18■□□□□ 0.82
SMIM3-201ENST00000526627 GSK3BP49841 420 aa20.18■□□□□ 0.82
SMIM3-201ENST00000526627 IL2P60568 153 aa20.18■□□□□ 0.82
SMIM3-201ENST00000526627 NFYCQ13952 458 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms