RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 UGT1A8Q9HAW9 530 aa16.8■□□□□ 0.28
CCS-203ENST00000526058 RDH14Q9HBH5 336 aa16.8■□□□□ 0.28
CCS-203ENST00000526058 EPB41L5Q9HCM4 733 aa16.8■□□□□ 0.28
CCS-203ENST00000526058 ASCL3Q9NQ33 180 aa16.8■□□□□ 0.28
CCS-203ENST00000526058 LZTFL1Q9NQ48 299 aa16.8■□□□□ 0.28
CCS-203ENST00000526058 KCTD3Q9Y597 815 aa16.8■□□□□ 0.28
CCS-203ENST00000526058 ARL5AQ9Y689 179 aa16.8■□□□□ 0.28
CCS-203ENST00000526058 PTPRQQ9UMZ3 2332 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 CCDC187A0A096LP49 1063 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 AGRPO00253 132 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 GAPDHSO14556 408 aaPredicted RBP16.79■□□□□ 0.28
CCS-203ENST00000526058 CHUKO15111 745 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 SNX2O60749 519 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 DXOO77932 396 aaKnown RBP16.79■□□□□ 0.28
CCS-203ENST00000526058 ITPKBP27987 946 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 CCZ1BP86790 482 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 CCZ1P86791 482 aaPredicted RBP16.79■□□□□ 0.28
CCS-203ENST00000526058 MSLNQ13421 630 aaPredicted RBP16.79■□□□□ 0.28
CCS-203ENST00000526058 PLA2G4EQ3MJ16 856 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 NKAIN2Q5VXU1 208 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 ARHGEF18Q6ZSZ5 1173 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 USP53Q70EK8 1073 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 ZNF761Q86XN6 746 aaPredicted RBP16.79■□□□□ 0.28
CCS-203ENST00000526058 ZNF547Q8IVP9 402 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 SFRP1Q8N474 314 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 ATG4AQ8WYN0 398 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 LIN37Q96GY3 246 aaPredicted RBP16.79■□□□□ 0.28
CCS-203ENST00000526058 ZNF578Q96N58 590 aaPredicted RBP16.79■□□□□ 0.28
CCS-203ENST00000526058 SLC46A1Q96NT5 459 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 TBL1YQ9BQ87 522 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 TMEM121Q9BTD3 319 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 KLC4Q9NSK0 619 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 SLC23A2Q9UGH3 650 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 LHX6Q9UPM6 363 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 PKP3Q9Y446 797 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 PCDHGA8Q9Y5G5 932 aa16.79■□□□□ 0.28
CCS-203ENST00000526058 ZNF106Q9H2Y7 1883 aaKnown RBP16.79■□□□□ 0.28
CCS-203ENST00000526058 GLYATL1P3A0A0U1RQE8 302 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 A6NCN8 305 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 GPR89AB7ZAQ6 455 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 STX7O15400 261 aaKnown RBP16.78■□□□□ 0.28
CCS-203ENST00000526058 VEGFDO43915 354 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 CDK14O94921 469 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 METTL18O95568 372 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 CCDC175P0C221 793 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 GPR89BP0CG08 455 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 HGFP14210 728 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 CD1CP29017 333 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 RBMS1P29558 406 aaKnown RBP16.78■□□□□ 0.28
CCS-203ENST00000526058 CCKBRP32239 447 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 GPR3P46089 330 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 ZFP36L1Q07352 338 aaKnown RBP16.78■□□□□ 0.28
CCS-203ENST00000526058 CCDC173Q0VFZ6 552 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 TMEM115Q12893 351 aaPredicted RBP16.78■□□□□ 0.28
CCS-203ENST00000526058 PARP6Q2NL67 630 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 SEL1L2Q5TEA6 688 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 MEI1Q5TIA1 1274 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 ZDHHC20Q5W0Z9 365 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 DENND5AQ6IQ26 1287 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 IYDQ6PHW0 289 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 IGF2-ASQ6U949 168 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 RAB11FIP2Q7L804 512 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 KLHDC8BQ8IXV7 354 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 GDAP1Q8TB36 358 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 DTX3LQ8TDB6 740 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 CRELD1Q96HD1 420 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 TMEM74Q96NL1 305 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 SEMA6CQ9H3T2 930 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 PRDM8Q9NQV8 689 aa16.78■□□□□ 0.28
CCS-203ENST00000526058 LOC400499M0QZD8 3231 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 TMX2-CTNND1H3BSU7 103 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 ZNF189O75820 626 aaPredicted RBP16.77■□□□□ 0.28
CCS-203ENST00000526058 TNFSF15O95150 251 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 CPNE6O95741 557 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 F3P13726 295 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 ZNF7P17097 686 aaPredicted RBP16.77■□□□□ 0.28
CCS-203ENST00000526058 LPOP22079 712 aaPredicted RBP16.77■□□□□ 0.28
CCS-203ENST00000526058 FASLGP48023 281 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 ERVPABLB-1P60509 514 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 RPS6KA1Q15418 735 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 TAF1AQ15573 450 aaPredicted RBP16.77■□□□□ 0.28
CCS-203ENST00000526058 INSCQ1MX18 579 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 MAP9Q49MG5 647 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.77■□□□□ 0.28
CCS-203ENST00000526058 KCTD11Q693B1 232 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 ZNF574Q6ZN55 896 aaPredicted RBP16.77■□□□□ 0.28
CCS-203ENST00000526058 PIM3Q86V86 326 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 LRRTM4Q86VH4 590 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 SLC13A5Q86YT5 568 aaPredicted RBP16.77■□□□□ 0.28
CCS-203ENST00000526058 SLITRK4Q8IW52 837 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 FBXO39Q8N4B4 442 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 TAB3Q8N5C8 712 aaPredicted RBP16.77■□□□□ 0.28
CCS-203ENST00000526058 OR4K2Q8NGD2 314 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 NAF1Q96HR8 494 aaKnown RBP16.77■□□□□ 0.28
CCS-203ENST00000526058 NUDT22Q9BRQ3 303 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 STRADBQ9C0K7 418 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 OSGEPL1Q9H4B0 414 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 KCNK4Q9NYG8 393 aa16.77■□□□□ 0.28
CCS-203ENST00000526058 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCS-203ENST00000526058 SCHIP1Q9P0W5 487 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms