RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 DENND3A2RUS2 1198 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 LRRC53A6NM62 1247 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 TMEM110-MUSTN1A8MSY1 372 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 TMCO5BA8MYB1 307 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CXCL11O14625 94 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 LDLRAD4O15165 306 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CETN3O15182 167 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 B4GALT5O43286 388 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 TGFB1I1O43294 461 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CALUO43852 315 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 ZNF500O60304 480 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CEP104O60308 925 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 UGDHO60701 494 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 GFPT2O94808 682 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 RTN3O95197 1032 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 STBD1O95210 358 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 NFATC1O95644 943 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 F9P00740 461 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 ADRB2P07550 413 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 TPM1P09493 284 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 DLATP10515 647 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 EPB41P11171 864 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 FCGR2AP12318 317 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 HOXB9P17482 250 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 GAP43P17677 238 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 BMP5P22003 454 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 KLRC2P26717 231 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 TACR3P29371 465 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 TCF7P36402 384 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 ARHGAP25P42331 645 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 PAFAH1B1P43034 410 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 RXRGP48443 463 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 GCLMP48507 274 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CCR9P51686 369 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CLCN3P51790 818 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 EFNA5P52803 228 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 POLGP54098 1239 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 OAZ1P54368 228 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 NAP1L1P55209 391 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 POLR2FP61218 127 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 GNG11P61952 73 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 TUBA4AP68366 448 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 MRPS25P82663 173 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 BEX3Q00994 111 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 MYL7Q01449 175 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 MAP2K1Q02750 393 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 SPAG1Q07617 926 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 SEMA3AQ14563 771 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 ZNF268Q14587 947 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 PTPN14Q15678 1187 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 ASIC2Q16515 512 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 SLC18A3Q16572 532 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 KNOP1Q1ED39 458 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 SLC9B1Q4ZJI4 515 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 ZCWPW2Q504Y3 356 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 TDRD12Q587J7 1177 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CEP78Q5JTW2 689 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 TAF3Q5VWG9 929 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CENPPQ6IPU0 288 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 PDXDC1Q6P996 788 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 ZNF788Q6ZQV5 615 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 MOB3CQ70IA8 216 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 ANO5Q75V66 913 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 FASTKD5Q7L8L6 764 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 NIPA1Q7RTP0 329 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CACNA2D4Q7Z3S7 1137 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 HAUS6Q7Z4H7 955 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 KIAA1328Q86T90 577 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CCDC25Q86WR0 208 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CBWD2Q8IUF1 395 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 TMEM139Q8IV31 216 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 METTL13Q8N6R0 699 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 FAM133AQ8N9E0 248 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 GPRC5AQ8NFJ5 357 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 NEK11Q8NG66 645 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 OR6J1Q8NGC5 347 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 OR52N4Q8NGI2 321 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 ZFPM2Q8WW38 1151 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 CNOT9Q92600 299 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 HDAC2Q92769 488 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 DPF1Q92782 380 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 ATP6V0A1Q93050 837 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 NLRP4Q96MN2 994 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 INPP4AQ96PE3 977 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 ACCSQ96QU6 501 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 PSMB7Q99436 277 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 FAM213AQ9BRX8 229 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 PI4K2AQ9BTU6 479 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 APOL6Q9BWW8 343 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 QTRT1Q9BXR0 403 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 FAM49AQ9H0Q0 323 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 NDST4Q9H3R1 872 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 PLEKHA4Q9H4M7 779 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 EPHX3Q9H6B9 360 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 PARVGQ9HBI0 331 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 XPNPEP1Q9NQW7 623 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 AGPAT3Q9NRZ7 376 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 OLA1Q9NTK5 396 aaKnown RBP2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 TBC1D22BQ9NU19 505 aa2.8□□□□□ -1.96
CKS1BP7-201ENST00000522230 SMARCAL1Q9NZC9 954 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms