RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 FKBP1BP68106 108 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SLC25A52Q3SY17 297 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 HIPK1Q86Z02 1210 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 PCDH20Q8N6Y1 951 aaKnown RBP12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SELENOMQ8WWX9 145 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SGCDQ92629 289 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 S100PBPQ96BU1 408 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 LGMNQ99538 433 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 ACSS3Q9H6R3 686 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 CNTNAP1P78357 1384 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 MED1Q15648 1581 aaPredicted RBP12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 IFNGP01579 166 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 CYP17A1P05093 508 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SNRPB2P08579 225 aaKnown RBP12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 IGFALSP35858 605 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 UGT2B15P54855 530 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 RAPSNQ13702 412 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 LIPMQ5VYY2 423 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 VANGL1Q8TAA9 524 aaPredicted RBP12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SNX27Q96L92 541 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SPATA9Q9BWV2 254 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 TRMT13Q9NUP7 481 aaKnown RBP12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 ERGIC3Q9Y282 383 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SLC27A5Q9Y2P5 690 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 REXO2Q9Y3B8 237 aaKnown RBP12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 B4GALT4O60513 344 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 IFI30P13284 250 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 BMP7P18075 431 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SNAP47Q5SQN1 464 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 LRRN4Q8WUT4 740 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SEMA3CQ99985 751 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 FAM105AQ9NUU6 356 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 FTH1P02794 183 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 PFKPQ01813 784 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 RGL4Q8IZJ4 473 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 ACOT12Q8WYK0 555 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 KREMEN1Q96MU8 473 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 LMAN2LQ9H0V9 348 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 TNKS2Q9H2K2 1166 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 S100A14Q9HCY8 104 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 DNAJB4Q9UDY4 337 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 ZNF510Q9Y2H8 683 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 RAP2CQ9Y3L5 183 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 MOXD2PA6NHM9 499 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 PGRMC2O15173 223 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 ALOX15BO15296 676 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 RSL1D1O76021 490 aaKnown RBP12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 RLN1P04808 185 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 CCNYL3P0C7X3 344 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 HDCP19113 662 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 TFEBP19484 476 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 CAPGP40121 348 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 SULT2A1Q06520 285 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 NRF1Q16656 503 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 AADATQ8N5Z0 425 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 ZNF615Q8N8J6 731 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 JOSD2Q8TAC2 188 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 TEX47Q8TBZ9 253 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 SNX15Q9NRS6 342 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 KLF15Q9UIH9 416 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 NID2Q14112 1375 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 OR6C75A6NL08 312 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 BUD23O43709 281 aaKnown RBP12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 SSX5O60225 188 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 DHFRP00374 187 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 C4BPAP04003 597 aaKnown RBP12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 SP3Q02447 781 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 PEX6Q13608 980 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 INSCQ1MX18 579 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 CTC1Q2NKJ3 1217 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 ISLR2Q6UXK2 745 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 RASAL3Q86YV0 1011 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 TTC29Q8NA56 475 aaPredicted RBP12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 TMCO6Q96DC7 493 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 PPP3R2Q96LZ3 170 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 PWWP2AQ96N64 755 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 FGFBP2Q9BYJ0 223 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 NXF3Q9H4D5 531 aaKnown RBP12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 KNDC1Q76NI1 1749 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 RGSL1A5PLK6 1076 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 ERCC2P18074 760 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 KCNA5P22460 613 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 PSME3P61289 254 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 MRPS22P82650 360 aaKnown RBP12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 PPP2R2BQ00005 443 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 PSMD5Q16401 504 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 SDHAF4Q5VUM1 108 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 ZNF549Q6P9A3 640 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 GPALPP1Q8IXQ4 340 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 PIGKQ92643 395 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 NELL1Q92832 810 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 RERGQ96A58 199 aaPredicted RBP12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 ARL5BQ96KC2 179 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 OMDQ99983 421 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 HERC2P3Q9BVR0 1158 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 TMEM168Q9H0V1 697 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 CYTH4Q9UIA0 394 aa12.03□□□□□ -0.48
ERGIC1-208ENST00000520399 LEF1Q9UJU2 399 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms