RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 MYCBPQ99417 103 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-215ENST00000519474 ZSCAN5AQ9BUG6 496 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 OR2AG1Q9H205 316 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 TRABDQ9H4I3 376 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 PRORYQ9H606 182 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 SYNDIG1Q9H7V2 258 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 RDH14Q9HBH5 336 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 PACSIN2Q9UNF0 486 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-215ENST00000519474 IGHV1OR21-1A0A087WYE8 117 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 TCRBV7S2A1N4TA0A589 114 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 MACROD2A1Z1Q3 448 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 A6NCN8 305 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 C5orf60A6NFR6 353 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 PRR19A6NJB7 356 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 AGRPO00253 132 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 GAPDHSO14556 408 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-215ENST00000519474 PLD2O14939 933 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 KCNN4O15554 427 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 EFSO43281 561 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 COQ9O75208 318 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 MTX2O75431 263 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 CDK14O94921 469 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 TJP3O95049 919 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 CPNE6O95741 557 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 FTCDO95954 541 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 HGFP14210 728 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 HLA-DPA1P20036 260 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 CETN2P41208 172 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 ABCG1P45844 678 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 FASLGP48023 281 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 GEMP55040 296 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 TLE3Q04726 772 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 OLIG2Q13516 323 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 CHRNA6Q15825 494 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 SOWAHCQ53LP3 525 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-215ENST00000519474 PDPK2PQ6A1A2 396 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 DENND5AQ6IQ26 1287 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 CLEC14AQ86T13 490 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF547Q8IVP9 402 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 SLITRK4Q8IW52 837 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 KLHDC8BQ8IXV7 354 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 RNF10Q8N5U6 811 aaKnown RBP9.23□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF248Q8NDW4 579 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 IPMKQ8NFU5 416 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 CCDC110Q8TBZ0 833 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 SLC37A2Q8TED4 501 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 HES6Q96HZ4 224 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 PLEKHG4BQ96PX9 1271 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 VPS35Q96QK1 796 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 NUDT22Q9BRQ3 303 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 GBA3Q9H227 469 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 EPB41L5Q9HCM4 733 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 PRDM8Q9NQV8 689 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 THSD1Q9NS62 852 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 HACD3Q9P035 362 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 SCHIP1Q9P0W5 487 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-215ENST00000519474 PDP2Q9P2J9 529 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 RSPH14Q9UHP6 348 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 KCNK6Q9Y257 313 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 KCTD3Q9Y597 815 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 APC2O95996 2303 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 ACACAQ13085 2346 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 IGF2RP11717 2491 aa9.23□□□□□ -0.93
HDAC3-215ENST00000519474 IGHV5-10-1A0A0J9YXX1 117 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 MIF4GDA9UHW6 222 aaKnown RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 VEGFDO43915 354 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 SNX2O60749 519 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 ANXA9O76027 345 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 CCL4P13236 92 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 ACP5P13686 325 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF7P17097 686 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 XRCC1P18887 633 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 ITIH1P19827 911 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 SLC5A2P31639 672 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 ETV5P41161 510 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 SLC19A1P41440 591 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 MLLT3P42568 568 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 CD151P48509 253 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 LIMK2P53671 638 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 EIF3IQ13347 325 aaKnown RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 KLF1Q13351 362 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 SPARCL1Q14515 664 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 C16orf72Q14CZ0 275 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 CLPPQ16740 277 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 TMEM71Q6P5X7 295 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 C11orf96Q7Z7L8 435 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF761Q86XN6 746 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 SYCE1Q8N0S2 351 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 MNS1Q8NEH6 495 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 SLC35B2Q8TB61 432 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF398Q8TD17 642 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 BRSK1Q8TDC3 778 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 BLOC1S5Q8TDH9 187 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 APOL2Q9BQE5 337 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 FICDQ9BVA6 458 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 DPH1Q9BZG8 443 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 STRADBQ9C0K7 418 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 ARNT2Q9HBZ2 717 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 SARS2Q9NP81 518 aaKnown RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 KLC4Q9NSK0 619 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms