RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 RALGPS1Q5JS13 557 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 BROXQ5VW32 411 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 AADACL2Q6P093 401 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 CERS6Q6ZMG9 384 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 FAM83HQ6ZRV2 1179 aaPredicted RBP8.54□□□□□ -1.04
PABPC1-202ENST00000517403 CHST15Q7LFX5 561 aaPredicted RBP8.54□□□□□ -1.04
PABPC1-202ENST00000517403 ARHGAP22Q7Z5H3 698 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 VSTM4Q8IW00 320 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 KCTD6Q8NC69 237 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 RNF214Q8ND24 703 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 LSM14AQ8ND56 463 aaKnown RBP8.54□□□□□ -1.04
PABPC1-202ENST00000517403 WDR48Q8TAF3 677 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 SCG3Q8WXD2 468 aaKnown RBP8.54□□□□□ -1.04
PABPC1-202ENST00000517403 HAUS1Q96CS2 278 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 MED8Q96G25 268 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 AGAP3Q96P47 875 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 PLEKHG4BQ96PX9 1271 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 RUFY1Q96T51 708 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 EGFL7Q9UHF1 273 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 IL17BQ9UHF5 180 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 WDR37Q9Y2I8 494 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 REXO2Q9Y3B8 237 aaKnown RBP8.54□□□□□ -1.04
PABPC1-202ENST00000517403 HEY1Q9Y5J3 304 aa8.54□□□□□ -1.04
PABPC1-202ENST00000517403 MRPS18BQ9Y676 258 aaKnown RBP8.54□□□□□ -1.04
PABPC1-202ENST00000517403 SETXQ7Z333 2677 aaKnown RBP8.54□□□□□ -1.04
PABPC1-202ENST00000517403 PIEZO2Q9H5I5 2752 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 EFCAB7A8K855 629 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 RHPN2P1A8MT19 583 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 B8ZZF3 427 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 BHMG1C9JSJ3 638 aaPredicted RBP8.53□□□□□ -1.04
PABPC1-202ENST00000517403 TERTO14746 1132 aaKnown RBP8.53□□□□□ -1.04
PABPC1-202ENST00000517403 CHUKO15111 745 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 SGTAO43765 313 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 RECKO95980 971 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 FURINP09958 794 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 ZNF30P17039 623 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 NFKB1P19838 968 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 COMTP21964 271 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 SLC19A1P41440 591 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 CTSCP53634 463 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 UCNP55089 124 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 COPS2P61201 443 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 SH3BP2P78314 561 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 NFATC3Q12968 1075 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 EIF3IQ13347 325 aaKnown RBP8.53□□□□□ -1.04
PABPC1-202ENST00000517403 SQSTM1Q13501 440 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 PDK2Q15119 407 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 KCTD19Q17RG1 926 aaPredicted RBP8.53□□□□□ -1.04
PABPC1-202ENST00000517403 SNAP47Q5SQN1 464 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 DUS1LQ6P1R4 473 aaKnown RBP8.53□□□□□ -1.04
PABPC1-202ENST00000517403 IYDQ6PHW0 289 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 TMC3Q7Z5M5 1100 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 TMEM135Q86UB9 458 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 PIM3Q86V86 326 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 TMEM151BQ8IW70 566 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 OR4D9Q8NGE8 314 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 ATL2Q8NHH9 583 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 KIAA1524Q8TCG1 905 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 RSC1A1Q92681 617 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 RTP4Q96DX8 246 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 PPM1MQ96MI6 270 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 SPSB2Q99619 263 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 FAM118BQ9BPY3 351 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 CDH19Q9H159 772 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 OR2AG1Q9H205 316 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 BPIFA1Q9NP55 256 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 STARD5Q9NSY2 213 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 KCNK4Q9NYG8 393 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 DONSONQ9NYP3 566 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 VPS18Q9P253 973 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 UVRAGQ9P2Y5 699 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 KLHL3Q9UH77 587 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 DCTN4Q9UJW0 460 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 PCDHGA3Q9Y5H0 932 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 BZW2Q9Y6E2 419 aaKnown RBP8.53□□□□□ -1.04
PABPC1-202ENST00000517403 MYO18BQ8IUG5 2567 aa8.53□□□□□ -1.04
PABPC1-202ENST00000517403 MN1Q10571 1320 aaPredicted RBP8.53□□□□□ -1.04
PABPC1-202ENST00000517403 FER1L5A0AVI2 2057 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 TNRC6AQ8NDV7 1962 aaKnown RBP8.52□□□□□ -1.05
PABPC1-202ENST00000517403 SSU72P8A0A1W2PR75 194 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 OR52A4PA6NMU1 304 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 ANKRD66B4E2M5 251 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 NKX2-8O15522 239 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 NUAK1O60285 661 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 SNX2O60749 519 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 PMPCBO75439 489 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 DLGAP3O95886 979 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 H2AFZP0C0S5 128 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 TNNT1P13805 278 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 DESP17661 470 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 NR1D1P20393 614 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 OAS2P29728 719 aaKnown RBP8.52□□□□□ -1.05
PABPC1-202ENST00000517403 MAPK9P45984 424 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 EPHB1P54762 984 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 DRG2P55039 364 aaKnown RBP8.52□□□□□ -1.05
PABPC1-202ENST00000517403 DCDC1P59894 354 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 HHEXQ03014 270 aa8.52□□□□□ -1.05
PABPC1-202ENST00000517403 MSLNQ13421 630 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-202ENST00000517403 SEPT7Q16181 437 aaKnown RBP8.52□□□□□ -1.05
PABPC1-202ENST00000517403 LINC01559Q495D7 138 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms