RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 EML2O95834 649 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 F3P13726 295 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 BPIP17213 487 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 VCLP18206 1134 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 CD68P34810 354 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-215ENST00000515516 MAPK9P45984 424 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 ZNF75DP51815 510 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 COPS2P61201 443 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 MPP3Q13368 585 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 XRCC4Q13426 336 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 PPP2R5EQ16537 467 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 SNAP47Q5SQN1 464 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-215ENST00000515516 ZNF648Q5T619 568 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-215ENST00000515516 CRTC3Q6UUV7 619 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 ADGRG6Q86SQ4 1221 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 LRRTM4Q86VH4 590 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 ZFAND4Q86XD8 727 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 TRIM48Q8IWZ4 208 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 IPMKQ8NFU5 416 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 SNRNP27Q8WVK2 155 aaKnown RBP13.5□□□□□ -0.25
TCOF1-215ENST00000515516 NCSTNQ92542 709 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 MRFAP1L1Q96HT8 127 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 QKIQ96PU8 341 aaKnown RBP eCLIP13.5□□□□□ -0.25
TCOF1-215ENST00000515516 PLEKHG4BQ96PX9 1271 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 FSD1LQ9BXM9 530 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 EPB41L1Q9H4G0 881 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.5□□□□□ -0.25
TCOF1-215ENST00000515516 HACD3Q9P035 362 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 CPNE7Q9UBL6 633 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 RSPH14Q9UHP6 348 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 TFR2Q9UP52 801 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 SPO11Q9Y5K1 396 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 PCYT1BQ9Y5K3 369 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-215ENST00000515516 LRP4O75096 1905 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 LOC285095A0A1B0GVY8 99 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 MACROD2A1Z1Q3 448 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 PDZK1P1A8MUH7 402 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 C9orf172C9J069 976 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 F5H423 210 aaPredicted RBP13.49□□□□□ -0.25
TCOF1-215ENST00000515516 APOC4-APOC2K7ER74 178 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 STK10O94804 968 aaKnown RBP13.49□□□□□ -0.25
TCOF1-215ENST00000515516 APOC2P02655 101 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 PRB1P04280 392 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
TCOF1-215ENST00000515516 THRAP10827 490 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 CCL4P13236 92 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 HLA-DPA1P20036 260 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 HMGCLP35914 325 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 CLCNKAP51800 687 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 EPHA4P54764 986 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 CFHR1Q03591 330 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 ADCY2Q08462 1091 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 PRPSAP1Q14558 356 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 TGIF1Q15583 401 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 PLA2G4EQ3MJ16 856 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 SIRPB2Q5JXA9 342 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 ITPRIPL1Q6GPH6 555 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 WDR74Q6RFH5 385 aaPredicted RBP13.49□□□□□ -0.25
TCOF1-215ENST00000515516 KDELC1Q6UW63 502 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 BBS12Q6ZW61 710 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 GLT6D1Q7Z4J2 308 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 FAM129CQ86XR2 697 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 ZNF567Q8N184 647 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 BRSK1Q8TDC3 778 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 BLOC1S5Q8TDH9 187 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 KRT35Q92764 455 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 ASPSCR1Q9BZE9 553 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 PRDM8Q9NQV8 689 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 SLC39A1Q9NY26 324 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 FOXJ2Q9P0K8 574 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 PKP3Q9Y446 797 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 PCDHA3Q9Y5H8 950 aa13.49□□□□□ -0.25
TCOF1-215ENST00000515516 RP1P56715 2156 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 NBEAQ8NFP9 2946 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 SOWAHDA6NJG2 315 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 EFCAB7A8K855 629 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 A8MU76 341 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 STMND1H3BQB6 276 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 AURKAO14965 403 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 CHUKO15111 745 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 MTX2O75431 263 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 ANXA9O76027 345 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 VIPP01282 170 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 FGF3P11487 239 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-215ENST00000515516 ZNF7P17097 686 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-215ENST00000515516 CSF2RBP32927 897 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 CTNNA1P35221 906 aaKnown RBP13.48□□□□□ -0.25
TCOF1-215ENST00000515516 SPAM1P38567 509 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 MARCKSL1P49006 195 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 ATP1A2P50993 1020 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 GEMP55040 296 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 RWDD2BP57060 319 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 RAB15P59190 212 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 SLC1A5Q15758 541 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 DCAF12Q5T6F0 453 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 CDKL3Q8IVW4 592 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-215ENST00000515516 TXLNBQ8N3L3 684 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 ART4Q93070 314 aa13.48□□□□□ -0.25
TCOF1-215ENST00000515516 LRRC45Q96CN5 670 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms