RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CLCA4Q14CN2 919 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 CDK10Q15131 360 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 PLEKHG4Q58EX7 1191 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 FAXCQ5TGI0 409 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 SCYL2Q6P3W7 929 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 FBXL19Q6PCT2 694 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC26A9Q7LBE3 791 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 ARCQ7LC44 396 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 AMIGO2Q86SJ2 522 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 DSG4Q86SJ6 1040 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 IGFN1Q86VF2 1251 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 CRYBG2Q8N1P7 616 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 CCDC185Q8N715 623 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 SNX31Q8N9S9 440 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 LRGUKQ96M69 825 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 RMND5AQ9H871 391 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 KCNK13Q9HB14 408 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 SPON1Q9HCB6 807 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 ANLNQ9NQW6 1124 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 RAB6BQ9NRW1 208 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 FLRT1Q9NZU1 646 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 PAK5Q9P286 719 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 MFHAS1Q9Y4C4 1052 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 CORINQ9Y5Q5 1042 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC22A7Q9Y694 548 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 FNDC1Q4ZHG4 1894 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 NLRC5Q86WI3 1866 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 SMIM35A0A1B0GVV1 85 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 C2orf71A6NGG8 1288 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 CXorf49A8MYA2 514 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 FPGTO14772 594 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 FAM155BO75949 473 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 METTL18O95568 372 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 ITGB1P05556 798 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 CYP2F1P24903 491 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 MAOBP27338 520 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 GTF2A2P52657 109 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 ERVK-8P63133 956 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC18A2Q05940 514 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 PCBP1Q15365 356 aaKnown RBP eCLIP7.43□□□□□ -1.225e-8■■■■■ 41.6
PDLIM5-219ENST00000514743 CYP27C1Q4G0S4 372 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 HES5Q5TA89 166 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 NOTUMQ6P988 496 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 FKBP9P1Q75LS8 142 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 ADCK1Q86TW2 530 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 LRRC6Q86X45 466 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 PHTF2Q8N3S3 785 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 POU5F2Q8N7G0 328 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 ZC3H10Q96K80 434 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 KCTD15Q96SI1 283 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 TRIM56Q9BRZ2 755 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 TMEM120AQ9BXJ8 343 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 GCOM2Q9BZD3 368 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 GOLGA2P5Q9HBQ8 144 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 CD274Q9NZQ7 290 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 TRMT6Q9UJA5 497 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 NRCAMQ92823 1304 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 SMIM28A0A1B0GU29 152 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 HEATR9A2RTY3 570 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 GLTPD2A6NH11 291 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 SLITRK5O94991 958 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 IL6P05231 212 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 CKBP12277 381 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 IFI30P13284 250 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 RPS2P15880 293 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 HK1P19367 917 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 IGFBP6P24592 240 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 HOXA6P31267 233 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 UQCRC1P31930 480 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 BCAR1P56945 870 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 RPL26P61254 145 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 FAAP100Q0VG06 881 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 BST2Q10589 180 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 DOC2AQ14183 400 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 GRM7Q14831 915 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 PPP1R3AQ16821 1122 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 ESCO2Q56NI9 601 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 FBXO47Q5MNV8 452 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 PRAMEF19Q5SWL8 479 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 TPGS2Q68CL5 300 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 NCBP2-AS2Q69YL0 99 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 ABRAXAS1Q6UWZ7 409 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 HERC6Q8IVU3 1022 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 AHI1Q8N157 1196 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 ANKRD52Q8NB46 1076 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 BEST2Q8NFU1 509 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 OR6B3Q8NGW1 331 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 POC1BQ8TC44 478 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 MCOLN3Q8TDD5 553 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 COPS4Q9BT78 406 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 NCOR1P1Q9H4R4 102 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF696Q9H7X3 374 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF229Q9UJW7 825 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 PRELID3BQ9Y3B1 194 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 MYLKQ15746 1914 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 SHROOM3Q8TF72 1996 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 RRN3P2A6NIE6 340 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC15A5A6NIM6 579 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 HAS3O00219 553 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms