RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CCDC70Q6NSX1 233 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 RAD9BQ6WBX8 426 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 USP53Q70EK8 1073 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 ZNF761Q86XN6 746 aaPredicted RBP10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 TMTC1Q8IUR5 882 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 RCBTB1Q8NDN9 531 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 DTX3LQ8TDB6 740 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 SLC39A7Q92504 469 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 CCNL2Q96S94 520 aaPredicted RBP10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 SLC38A3Q99624 504 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 GORASP1Q9BQQ3 440 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 HEMGNQ9BXL5 484 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 TRABDQ9H4I3 376 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 STN1Q9H668 368 aaKnown RBP10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 ARFGAP3Q9NP61 516 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 AKAP7Q9P0M2 348 aaPredicted RBP10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 TMEM9Q9P0T7 183 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 PDP2Q9P2J9 529 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 TRHDEQ9UKU6 1024 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 TMPRSS11EQ9UL52 423 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 EFR3BQ9Y2G0 817 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 PCDHA3Q9Y5H8 950 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 EPN1Q9Y6I3 576 aaPredicted RBP10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 PTPRQQ9UMZ3 2332 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 KNTC1P50748 2209 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 TRBV23OR9-2A0A075B6M9 112 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 KIR2DS5A0A0G2JLQ3 304 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 A0A0G2JNG1 304 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 CCDC66A2RUB6 948 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 F5H423 210 aaPredicted RBP10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 KIR2DS3K7RE56 304 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 AGRPO00253 132 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 VEGFDO43915 354 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 IPO7O95373 1038 aaKnown RBP10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 PRB1P04280 392 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 CCL4P13236 92 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 CTNNA2P26232 953 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 CD82P27701 267 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 RBL1P28749 1068 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 CHRNA4P43681 627 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 EPHA4P54764 986 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 UBE2IP63279 158 aaKnown RBP10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 KIR2DS5Q14953 304 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 PLA2G4EQ3MJ16 856 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 ATP13A5Q4VNC0 1218 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 KHDC1Q4VXA5 237 aaKnown RBP10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 TMEM71Q6P5X7 295 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 WDR74Q6RFH5 385 aaPredicted RBP10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 CRTC3Q6UUV7 619 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 CCDC81Q6ZN84 652 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 PID1Q7Z2X4 250 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 GLT6D1Q7Z4J2 308 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 SLC9B2Q86UD5 537 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 LRRTM4Q86VH4 590 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 DTX1Q86Y01 620 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 TMEM139Q8IV31 216 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 ZNF547Q8IVP9 402 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 LRRC57Q8N9N7 239 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 AVL9Q8NBF6 648 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 AGBL5Q8NDL9 886 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 ACRBPQ8NEB7 543 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 IPMKQ8NFU5 416 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 OR10G6Q8NH81 332 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 TTC9Q92623 222 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 USP7Q93009 1102 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 SH3KBP1Q96B97 665 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 WBP1Q96G27 269 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 TIMM29Q9BSF4 260 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 LACRTQ9GZZ8 138 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 GBA3Q9H227 469 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 BPIFA1Q9NP55 256 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 KLC4Q9NSK0 619 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 HACD3Q9P035 362 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 SLC23A2Q9UGH3 650 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 RSPH14Q9UHP6 348 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 PCDHGA3Q9Y5H0 932 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 DUSP10Q9Y6W6 482 aa10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 GCN1Q92616 2671 aaKnown RBP10.32□□□□□ -0.76
HMGXB3-205ENST00000514469 ATRXP46100 2492 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 GRID2IPA4D2P6 1211 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 LILRA5A6NI73 299 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 OR5K4A6NMS3 321 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 H7C0C1 242 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 GAPDHSO14556 408 aaPredicted RBP10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 KMOO15229 486 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 EFSO43281 561 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 SNX2O60749 519 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 MTX2O75431 263 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 FGF3P11487 239 aaPredicted RBP10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 ZNF7P17097 686 aaPredicted RBP10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 MPSTP25325 297 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 SPAM1P38567 509 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 TNNT3P45378 269 aaPredicted RBP10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 ATP5OP48047 213 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 ARSDP51689 593 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 VAV2P52735 878 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 RWDD2BP57060 319 aa10.31□□□□□ -0.76
HMGXB3-205ENST00000514469 OTUD4Q01804 1114 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms