RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 PNPLA1Q8N8W4 532 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 MAFAQ8NHW3 353 aaPredicted RBP15.85■□□□□ 0.13
NUP54-214ENST00000514307 DTD2Q96FN9 168 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 PDLIM5Q96HC4 596 aaKnown RBP15.85■□□□□ 0.13
NUP54-214ENST00000514307 TFB2MQ9H5Q4 396 aaKnown RBP15.85■□□□□ 0.13
NUP54-214ENST00000514307 ZDHHC4Q9NPG8 344 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 LATS2Q9NRM7 1088 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 SPATS2LQ9NUQ6 558 aaKnown RBP15.85■□□□□ 0.13
NUP54-214ENST00000514307 FBXL12Q9NXK8 326 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 COPG2Q9UBF2 871 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 CD84Q9UIB8 345 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 EMCNQ9ULC0 261 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 PRUNE2Q8WUY3 3088 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 NARSO43776 548 aaKnown RBP15.84■□□□□ 0.13
NUP54-214ENST00000514307 TRIM13O60858 407 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 RNASEH2AO75792 299 aaKnown RBP15.84■□□□□ 0.13
NUP54-214ENST00000514307 TM7SF2O76062 418 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 ATP1B2P14415 290 aaPredicted RBP15.84■□□□□ 0.13
NUP54-214ENST00000514307 DRD4P21917 467 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 DGKAP23743 735 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 SGCGQ13326 291 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 LRRC32Q14392 662 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 MLF2Q15773 248 aaPredicted RBP15.84■□□□□ 0.13
NUP54-214ENST00000514307 HENMT1Q5T8I9 393 aaKnown RBP15.84■□□□□ 0.13
NUP54-214ENST00000514307 PIP5KL1Q5T9C9 394 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 LRRC8EQ6NSJ5 796 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 NEK5Q6P3R8 708 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 PAQR3Q6TCH7 311 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 ZYG11AQ6WRX3 759 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 RFLNAQ6ZTI6 216 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 USP30Q70CQ3 517 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 KBTBD6Q86V97 674 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 ADHFE1Q8IWW8 467 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 CENPLQ8N0S6 344 aaPredicted RBP15.84■□□□□ 0.13
NUP54-214ENST00000514307 STAG3L4Q8TBR4 150 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 SCAMP4Q969E2 229 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 NUS1Q96E22 293 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 SIPA1Q96FS4 1042 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 GPR78Q96P69 363 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 GPR21Q99679 349 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 C1QTNF7Q9BXJ2 289 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 DERL2Q9GZP9 239 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 KDM4CQ9H3R0 1056 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 IGSF5Q9NSI5 407 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 ZNF358Q9NW07 568 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 WNT16Q9UBV4 365 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 TMCO1Q9UM00 188 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 DUSP12Q9UNI6 340 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 MIA3Q5JRA6 1907 aa15.84■□□□□ 0.13
NUP54-214ENST00000514307 UNC80Q8N2C7 3258 aa15.83■□□□□ 0.13
NUP54-214ENST00000514307 IGLV3-16A0A075B6K0 115 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 SMIM24O75264 130 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 SNUPNO95149 360 aaKnown RBP15.83■□□□□ 0.12
NUP54-214ENST00000514307 SLC25A14O95258 325 aaPredicted RBP15.83■□□□□ 0.12
NUP54-214ENST00000514307 TRIM16O95361 564 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 TPBGLP0DKB5 382 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 CBSLP0DN79 551 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 C6P13671 934 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 BGNP21810 368 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 AKT1P31749 480 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 CBSP35520 551 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 COPAP53621 1224 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 RPS21P63220 83 aaKnown RBP15.83■□□□□ 0.12
NUP54-214ENST00000514307 TIAL1Q01085 375 aaKnown RBP eCLIP15.83■□□□□ 0.12
NUP54-214ENST00000514307 ZNF460Q14592 562 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 CHI3L2Q15782 390 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 CTSL3PQ5NE16 218 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 GPRC6AQ5T6X5 926 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 SLC22A9Q8IVM8 553 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 RHEBL1Q8TAI7 183 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 GLYATL1Q969I3 302 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 PLCD4Q9BRC7 762 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 ZCCHC2Q9C0B9 1178 aaKnown RBP15.83■□□□□ 0.12
NUP54-214ENST00000514307 FAM107BQ9H098 131 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 EPHX3Q9H6B9 360 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 POLMQ9NP87 494 aaPredicted RBP15.83■□□□□ 0.12
NUP54-214ENST00000514307 THAP1Q9NVV9 213 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 OXSMQ9NWU1 459 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 CPSF2Q9P2I0 782 aaKnown RBP15.83■□□□□ 0.12
NUP54-214ENST00000514307 FZD4Q9ULV1 537 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 MMP17Q9ULZ9 603 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 DOCK8Q8NF50 2099 aa15.83■□□□□ 0.12
NUP54-214ENST00000514307 A0A1W2PQF6 199 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 SYCE1LA8MT33 242 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 DNAJC6O75061 913 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 ADAM23O75077 832 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 NIPSNAP2O75323 286 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 WISP3O95389 354 aaPredicted RBP15.82■□□□□ 0.12
NUP54-214ENST00000514307 SERPINE1P05121 402 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 TROVE2P10155 538 aaKnown RBP eCLIP15.82■□□□□ 0.12
NUP54-214ENST00000514307 C7P10643 843 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 BMP1P13497 986 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 ZNF37AP17032 561 aaPredicted RBP15.82■□□□□ 0.12
NUP54-214ENST00000514307 TFEBP19484 476 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 ATP5F1P24539 256 aaPredicted RBP15.82■□□□□ 0.12
NUP54-214ENST00000514307 DRD3P35462 400 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 GPR1P46091 355 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 GLRBP48167 497 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 METAP1P53582 386 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 CCINQ13939 588 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms