RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 NAA11Q9BSU3 229 aaPredicted RBP3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 MSTO1Q9BUK6 570 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 NUP85Q9BW27 656 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 GPR88Q9GZN0 384 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 NPFFR1Q9GZQ6 430 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 TMEM39BQ9GZU3 492 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 ANKRD2Q9GZV1 360 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 LHPPQ9H008 270 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 RBM38Q9H0Z9 239 aaKnown RBP3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 MRPL44Q9H9J2 332 aaKnown RBP3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 GPR108Q9NPR9 543 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 HINT3Q9NQE9 182 aaKnown RBP3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 WNT16Q9UBV4 365 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 ACSL5Q9ULC5 683 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 RAI2Q9Y5P3 530 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 CLIC4Q9Y696 253 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 CLIP1P30622 1438 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 CNTNAP2Q9UHC6 1331 aa3.43□□□□□ -1.86
CALCOCO2-223ENST00000514267 A0A0G2JK05 382 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 BICDL2A1A5D9 508 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 ZNF814B7Z6K7 855 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 PSMD14O00487 310 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 MDM4O15151 490 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 IPO8O15397 1037 aaKnown RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 PLRG1O43660 514 aaKnown RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 SYNCRIPO60506 623 aaKnown RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 NDUFB8O95169 186 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 SIX3O95343 332 aaPredicted RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 GH2P01242 217 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 IFNA2P01563 188 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 ATP5BP06576 529 aaKnown RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 VPREB1P12018 145 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 GJA1P17302 382 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 PTMSP20962 102 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 NR2F2P24468 414 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 TCF7P36402 384 aaPredicted RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 CDKN2AP42771 156 aaKnown RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 MATR3P43243 847 aaKnown RBP eCLIP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 HTR6P50406 440 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 RASSF2P50749 326 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 TMF1P82094 1093 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 PTGR1Q14914 329 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 TNIP1Q15025 636 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 SNAPC1Q16533 368 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 ODF2Q5BJF6 829 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 ASPHD1Q5U4P2 390 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 MFSD6Q6ZSS7 791 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 CAMKMTQ7Z624 323 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 DNAJB7Q7Z6W7 309 aaPredicted RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 SNX32Q86XE0 403 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 IQCA1Q86XH1 822 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 MB21D2Q8IYB1 491 aaPredicted RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 SPATA6LQ8N4H0 392 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 PI4KAP1Q8N8J0 262 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 GDAP1Q8TB36 358 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 CDRT15Q96T59 188 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 EGFL8Q99944 293 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 WDR77Q9BQA1 342 aaPredicted RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 MRPL9Q9BYD2 267 aaKnown RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 HIPK2Q9H2X6 1198 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 SLCO5A1Q9H2Y9 848 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 KCNK15Q9H427 330 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 RETREG1Q9H6L5 497 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 ESRP2Q9H6T0 727 aaKnown RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 AAMDCQ9H7C9 122 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 ANKZF1Q9H8Y5 726 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 TRMT1Q9NXH9 659 aaKnown RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 CISD1Q9NZ45 108 aaKnown RBP3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 HMGXB3Q12766 1538 aa3.42□□□□□ -1.86
CALCOCO2-223ENST00000514267 KIF21BO75037 1637 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 TOP2BQ02880 1626 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 EDDM13A0A1B0GTR0 161 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 CPED1A4D0V7 1026 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 TMEM8BA6NDV4 472 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 H0YIN7 160 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 VCYO14598 125 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 SLC7A4O43246 635 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 STX6O43752 255 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 SLU7O95391 586 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 C22orf31O95567 290 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 ICAM1P05362 532 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 ATP6V1B1P15313 513 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 CHRNB2P17787 502 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 TCEA1P23193 301 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 FASLGP48023 281 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 PPP3CCP48454 512 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 GAD2Q05329 585 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 SCN1BQ07699 218 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 DUSP6Q16828 381 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 LETM2Q2VYF4 491 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 PPP6R3Q5H9R7 873 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 RUSC1-AS1Q66K80 236 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 HIST2H2BCQ6DN03 193 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 HIST2H2BDQ6DRA6 164 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 ANKRD54Q6NXT1 300 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 ZNF549Q6P9A3 640 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 TRAT1Q6PIZ9 186 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 TPRG1Q6ZUI0 275 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 MEPCEQ7L2J0 689 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 HAUS6Q7Z4H7 955 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms