RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 B3GNT8Q7Z7M8 397 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 TMPRSS12Q86WS5 348 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 BEND7Q8N7W2 519 aaPredicted RBP13.4□□□□□ -0.26
SNF8-206ENST00000509989 DCBLD1Q8N8Z6 715 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 RASGEF1AQ8N9B8 481 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 BRSK1Q8TDC3 778 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 ZNF778Q96MU6 729 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 VPS35Q96QK1 796 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 OSBPL9Q96SU4 736 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 FERMT1Q9BQL6 677 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 PRDM8Q9NQV8 689 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 RAB6BQ9NRW1 208 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 SLC2A6Q9UGQ3 507 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 CLCA2Q9UQC9 943 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 DRG1Q9Y295 367 aaKnown RBP13.4□□□□□ -0.26
SNF8-206ENST00000509989 DNAJC16Q9Y2G8 782 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 JRKLQ9Y4A0 524 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNF8-206ENST00000509989 ZZEF1O43149 2961 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 A6NCN8 305 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 PRR19A6NJB7 356 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 SGTAO43765 313 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 SNX2O60749 519 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 CSO75390 466 aaKnown RBP13.39□□□□□ -0.27
SNF8-206ENST00000509989 PRAMEF1O95521 474 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 PYGLP06737 847 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 GP1BAP07359 652 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 STIP1P31948 543 aaKnown RBP13.39□□□□□ -0.27
SNF8-206ENST00000509989 VPS41P49754 854 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 DUSP3P51452 185 aaPredicted RBP13.39□□□□□ -0.27
SNF8-206ENST00000509989 OR1D5P58170 312 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 CYP4F3Q08477 520 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 TMEM115Q12893 351 aaPredicted RBP13.39□□□□□ -0.27
SNF8-206ENST00000509989 SEMA5AQ13591 1074 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 SEPT6Q14141 434 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 DRICH1Q6PGQ1 229 aaPredicted RBP13.39□□□□□ -0.27
SNF8-206ENST00000509989 FAM83HQ6ZRV2 1179 aaPredicted RBP13.39□□□□□ -0.27
SNF8-206ENST00000509989 ZNF534Q76KX8 674 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 DET1Q7L5Y6 550 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 GALNT15Q8N3T1 639 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 GDAP1Q8TB36 358 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 ZNF398Q8TD17 642 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 SLC37A2Q8TED4 501 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 SCG3Q8WXD2 468 aaKnown RBP13.39□□□□□ -0.27
SNF8-206ENST00000509989 CDH19Q9H159 772 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 LRRC40Q9H9A6 602 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 KLC4Q9NSK0 619 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 LRIT1Q9P2V4 623 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 TTC7AQ9ULT0 858 aaPredicted RBP13.39□□□□□ -0.27
SNF8-206ENST00000509989 CELSR3Q9NYQ7 3312 aa13.39□□□□□ -0.27
SNF8-206ENST00000509989 OR2AG2A6NM03 316 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 NTN3O00634 580 aaPredicted RBP13.38□□□□□ -0.27
SNF8-206ENST00000509989 ZSCAN12O43309 604 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 SRP72O76094 671 aaKnown RBP13.38□□□□□ -0.27
SNF8-206ENST00000509989 SUN1O94901 812 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 CDK14O94921 469 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 RPLP0P05388 317 aaKnown RBP13.38□□□□□ -0.27
SNF8-206ENST00000509989 PROS1P07225 676 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
SNF8-206ENST00000509989 CRADDP78560 199 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 E2F1Q01094 437 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 CFHR1Q03591 330 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 NKAIN2Q5VXU1 208 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 ANKRD22Q5VYY1 191 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 SPRED1Q7Z699 444 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 PHYKPLQ8IUZ5 450 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 PIANPQ8IYJ0 282 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 ATXN7L3BQ96GX2 97 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 SRPK1Q96SB4 655 aaKnown RBP13.38□□□□□ -0.27
SNF8-206ENST00000509989 FRMD8P1Q9BZ68 369 aaPredicted RBP13.38□□□□□ -0.27
SNF8-206ENST00000509989 FOXP3Q9BZS1 431 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 ABCG4Q9H172 646 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 ASB8Q9H765 288 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 CASS4Q9NQ75 786 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 RAD18Q9NS91 495 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 WDR37Q9Y2I8 494 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 NEU2Q9Y3R4 380 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 PKP3Q9Y446 797 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 ENTPD2Q9Y5L3 495 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 ACACAQ13085 2346 aa13.38□□□□□ -0.27
SNF8-206ENST00000509989 C2orf81A6NN90 581 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 BRAFP15056 766 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 ZNF7P17097 686 aaPredicted RBP13.37□□□□□ -0.27
SNF8-206ENST00000509989 PBLDP30039 288 aaPredicted RBP13.37□□□□□ -0.27
SNF8-206ENST00000509989 MC4RP32245 332 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 FDFT1P37268 417 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 RPIAP49247 311 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 DRG2P55039 364 aaKnown RBP13.37□□□□□ -0.27
SNF8-206ENST00000509989 SEPT7Q16181 437 aaKnown RBP13.37□□□□□ -0.27
SNF8-206ENST00000509989 ST3GAL2Q16842 350 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 ISXQ2M1V0 245 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 PDPK2PQ6A1A2 396 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 ZNF574Q6ZN55 896 aaPredicted RBP13.37□□□□□ -0.27
SNF8-206ENST00000509989 CCNJLQ8IV13 435 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 LILRA3Q8N6C8 439 aaPredicted RBP13.37□□□□□ -0.27
SNF8-206ENST00000509989 CCDC89Q8N998 374 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 DDHD1Q8NEL9 900 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 UBE2Q2Q8WVN8 375 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 ZCCHC14Q8WYQ9 949 aaKnown RBP13.37□□□□□ -0.27
SNF8-206ENST00000509989 GLMNQ92990 594 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms