RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 KRT10P13645 584 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZNF28P17035 718 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 CD72P21854 359 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 CD40P25942 277 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 MC4RP32245 332 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 LSP1P33241 339 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ACVRL1P37023 503 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 RECQLP46063 649 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 KCNC1P48547 511 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCR3P51677 355 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 DGKEP52429 567 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 IFI35P80217 286 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ARF5P84085 180 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZBTB16Q05516 673 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 DBPQ10586 325 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 SLC10A2Q12908 348 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 BYSLQ13895 437 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ELAVL3Q14576 367 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZNF234Q14588 700 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 DLG2Q15700 870 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCNG2Q16589 344 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 SKIDA1Q1XH10 827 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 HNRNPA1L2Q32P51 320 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 SLC45A4Q5BKX6 768 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 MARC1Q5VT66 337 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 BROXQ5VW32 411 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 KAZNQ674X7 775 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ESRP1Q6NXG1 681 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 C4orf22Q6V702 233 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 CDKL3Q8IVW4 592 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCDC105Q8IYK2 499 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 TEX26Q8N6G2 289 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 NPWQ8N729 165 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 IL17RCQ8NAC3 791 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ATP11CQ8NB49 1132 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 TXNDC5Q8NBS9 432 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCNYQ8ND76 341 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 OR52K2Q8NGK3 314 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 RPLP0P6Q8NHW5 317 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 KIF18AQ8NI77 898 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ACTL9Q8TC94 416 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 HCAR2Q8TDS4 363 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 CELF6Q96J87 481 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 C16orf92Q96LL3 132 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 PSKH2Q96QS6 385 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 WDR24Q96S15 920 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 IL12RB2Q99665 862 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 PRRX2Q99811 253 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 CINPQ9BW66 212 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 HEMGNQ9BXL5 484 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 PDFQ9HBH1 243 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 DLGAP2Q9P1A6 1054 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 TRHDEQ9UKU6 1024 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 MFHAS1Q9Y4C4 1052 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 STON1Q9Y6Q2 735 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZNF318Q5VUA4 2279 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZNF839A8K0R7 811 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 WASH3PC4AMC7 463 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 C1QTNF3-AMACRE9PGA6 284 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 H7C0C1 242 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCDC188H7C350 402 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZNF500O60304 480 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 SNAP91O60641 907 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 TMCC1O94876 653 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 KLF8O95600 359 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 POP4O95707 220 aaKnown RBP5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 CD160O95971 181 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 IGSF6O95976 241 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 PEX11BO96011 259 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 RBP3P10745 1247 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCNB1P14635 433 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 HOXB2P14652 356 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 CA4P22748 312 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 NFKBIAP25963 317 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 PTX3P26022 381 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 CHRNA3P32297 505 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 ACTN2P35609 894 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 DEKP35659 375 aaKnown RBP5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 IL12RB1P42701 662 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 MMP13P45452 471 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 ATP5OP48047 213 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 CXCL12P48061 93 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 FNTAP49354 379 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 DNA2P51530 1060 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 SUOXP51687 545 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 EIF3EP60228 445 aaKnown RBP5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 AP1S1P61966 158 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 DYNLT1P63172 113 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 OTUD4Q01804 1114 aaKnown RBP5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 CKAP4Q07065 602 aaKnown RBP5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 ADCY2Q08462 1091 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 ITKQ08881 620 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 AP1B1Q10567 949 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZNF235Q14590 738 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 PRKD1Q15139 912 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 CYP1B1Q16678 543 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 ACCSLQ4AC99 568 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 TEX44Q53QW1 395 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 CARD16Q5EG05 197 aa5.53□□□□□ -1.52
HMGB1P44-201ENST00000508597 FAM46CQ5VWP2 391 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms