RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 VCLP18206 1134 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ITGB6P18564 788 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ITIH1P19827 911 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ACHEP22303 614 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 MYF6P23409 242 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 PTPN6P29350 595 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 NTSR1P30989 418 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 MCM5P33992 734 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 RFC2P35250 354 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SOAT1P35610 550 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 CCT6AP40227 531 aaKnown RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 MAGEA8P43361 318 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 GABRB2P47870 512 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 PEX5P50542 639 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SUOXP51687 545 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF135P52742 658 aaPredicted RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 VCPP55072 806 aaKnown RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 RAP2BP61225 183 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 TNFRSF17Q02223 184 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 FOXF2Q12947 444 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 IKQ13123 557 aaPredicted RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SLC39A14Q15043 492 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ZIK1Q3SY52 487 aaPredicted RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 EPC2Q52LR7 807 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 MDH1BQ5I0G3 518 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 C6orf136Q5SQH8 315 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SH2D4BQ5SQS7 431 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 C6orf163Q5TEZ5 329 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ANXA8L1Q5VT79 327 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 CACHD1Q5VU97 1274 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SFMBT2Q5VUG0 894 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 KRT79Q5XKE5 535 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 B3GNTL1Q67FW5 361 aaPredicted RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SLC9A4Q6AI14 798 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 OR6B2Q6IFH4 312 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 KLC3Q6P597 504 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 TMEM81Q6P7N7 255 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 METAP1DQ6UB28 335 aaPredicted RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 MICALCLQ6ZW33 695 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 CCDC80Q76M96 950 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 WDR5BQ86VZ2 330 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SERPINA12Q8IW75 414 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 MCEMP1Q8IX19 187 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SRRM1Q8IYB3 904 aaKnown RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 CLYBLQ8N0X4 340 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 TTC5Q8N0Z6 440 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SIRT6Q8N6T7 355 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 CCNYQ8ND76 341 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 FAM46DQ8NEK8 389 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 CASKIN2Q8WXE0 1202 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 TMIGD2Q96BF3 282 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 RNF31Q96EP0 1072 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 MMABQ96EY8 250 aaPredicted RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 C11orf24Q96F05 449 aaPredicted RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ELMOD3Q96FG2 381 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF558Q96NG5 402 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 OR2A14Q96R47 310 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ZSWIM1Q9BR11 485 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 PAAF1Q9BRP4 392 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SIKE1Q9BRV8 207 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 C17orf80Q9BSJ5 609 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 TPPP3Q9BW30 176 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 RTN4RQ9BZR6 473 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 POLR1EQ9GZS1 481 aaKnown RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 CLPBQ9H078 707 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 NUAK2Q9H093 628 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 TMEM117Q9H0C3 514 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 HRH4Q9H3N8 390 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 RMND5AQ9H871 391 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 KLC4Q9NSK0 619 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 MRPS18AQ9NVS2 196 aaKnown RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 TBC1D7Q9P0N9 293 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 TRMT6Q9UJA5 497 aaKnown RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SNX6Q9UNH7 406 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 USP22Q9UPT9 525 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 PLEKHA6Q9Y2H5 1048 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ATRNL1Q5VV63 1379 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 GSAPA4D1B5 854 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 TRIM49BA6NDI0 452 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 DNAJC9-AS1A6NH13 148 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 FAM47DPA6NHR8 397 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 GRM8O00222 908 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 PLRG1O43660 514 aaKnown RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 MITFO75030 526 aaPredicted RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 TACC1O75410 805 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 KRT6BP04259 564 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 PCCBP05166 539 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 KRT8P05787 483 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 RHOP08100 348 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 THRBP10828 461 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ACP1P24666 158 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 PTBP1P26599 531 aaKnown RBP eCLIP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 PON1P27169 355 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 CORO1AP31146 461 aaKnown RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 HOXA13P31271 388 aaPredicted RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 HTR7P34969 479 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 HNF1BP35680 557 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 CDKN1AP38936 164 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ALDH1A3P47895 512 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 KRT6CP48668 564 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms