RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 VASH2Q86V25 355 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 ZC3H18Q86VM9 953 aaKnown RBP16.02■□□□□ 0.16
LMNA-222ENST00000508500 KATNAL2Q8IYT4 538 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 TFB1MQ8WVM0 346 aaKnown RBP16.02■□□□□ 0.16
LMNA-222ENST00000508500 GLYATL1Q969I3 302 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 HAUS1Q96CS2 278 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 OXNAD1Q96HP4 312 aaPredicted RBP16.02■□□□□ 0.16
LMNA-222ENST00000508500 MRGPRX2Q96LB1 330 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 GPR63Q9BZJ6 419 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 OR2AG1Q9H205 316 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 TRIM39Q9HCM9 518 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 PRDM8Q9NQV8 689 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 PIKFYVEQ9Y2I7 2098 aa16.02■□□□□ 0.15
LMNA-222ENST00000508500 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.01■□□□□ 0.15
LMNA-222ENST00000508500 F5H423 210 aaPredicted RBP16.01■□□□□ 0.15
LMNA-222ENST00000508500 J3QKU1 62 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 SNX2O60749 519 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 MTX2O75431 263 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 SLC25A14O95258 325 aaPredicted RBP16.01■□□□□ 0.15
LMNA-222ENST00000508500 PTMAP06454 111 aaKnown RBP16.01■□□□□ 0.15
LMNA-222ENST00000508500 F3P13726 295 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 CLCNKAP51800 687 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 GPLD1P80108 840 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 HHEXQ03014 270 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 NFATC2Q13469 925 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 TFDP2Q14188 446 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 TFDP3Q5H9I0 405 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 ZNF569Q5MCW4 686 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 ZNF547Q8IVP9 402 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 ZNF567Q8N184 647 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 TTC30BQ8N4P2 665 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 PLEKHG4BQ96PX9 1271 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 SLC38A3Q99624 504 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 GORASP1Q9BQQ3 440 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 ZSCAN5AQ9BUG6 496 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 B3GNT4Q9C0J1 378 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 C10orf88Q9H8K7 445 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 BPIFA1Q9NP55 256 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 SARS2Q9NP81 518 aaKnown RBP16.01■□□□□ 0.15
LMNA-222ENST00000508500 KLC4Q9NSK0 619 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 WDR70Q9NW82 654 aa16.01■□□□□ 0.15
LMNA-222ENST00000508500 ZW10O43264 779 aa16■□□□□ 0.15
LMNA-222ENST00000508500 ZRANB2O95218 330 aaKnown RBP eCLIP16■□□□□ 0.15
LMNA-222ENST00000508500 WNT3AP56704 352 aa16■□□□□ 0.15
LMNA-222ENST00000508500 UBE2IP63279 158 aaKnown RBP16■□□□□ 0.15
LMNA-222ENST00000508500 PLA2G4EQ3MJ16 856 aa16■□□□□ 0.15
LMNA-222ENST00000508500 LINC00303Q3SY05 128 aa16■□□□□ 0.15
LMNA-222ENST00000508500 ATP13A5Q4VNC0 1218 aa16■□□□□ 0.15
LMNA-222ENST00000508500 ODF2Q5BJF6 829 aa16■□□□□ 0.15
LMNA-222ENST00000508500 C11orf63Q6NUN7 778 aa16■□□□□ 0.15
LMNA-222ENST00000508500 CRTC3Q6UUV7 619 aa16■□□□□ 0.15
LMNA-222ENST00000508500 BZW1Q7L1Q6 419 aaKnown RBP16■□□□□ 0.15
LMNA-222ENST00000508500 ARHGAP22Q7Z5H3 698 aa16■□□□□ 0.15
LMNA-222ENST00000508500 C11orf96Q7Z7L8 435 aa16■□□□□ 0.15
LMNA-222ENST00000508500 BMPERQ8N8U9 685 aa16■□□□□ 0.15
LMNA-222ENST00000508500 P3H4Q92791 437 aa16■□□□□ 0.15
LMNA-222ENST00000508500 COL26A1Q96A83 441 aa16■□□□□ 0.15
LMNA-222ENST00000508500 FCRL5Q96RD9 977 aa16■□□□□ 0.15
LMNA-222ENST00000508500 TAAR9Q96RI9 348 aa16■□□□□ 0.15
LMNA-222ENST00000508500 TBC1D10AQ9BXI6 508 aa16■□□□□ 0.15
LMNA-222ENST00000508500 ZNF624Q9P2J8 865 aaPredicted RBP16■□□□□ 0.15
LMNA-222ENST00000508500 FAM153AQ9UHL3 310 aa16■□□□□ 0.15
LMNA-222ENST00000508500 REXO2Q9Y3B8 237 aaKnown RBP16■□□□□ 0.15
LMNA-222ENST00000508500 PCDHGA3Q9Y5H0 932 aa16■□□□□ 0.15
LMNA-222ENST00000508500 B3GALT1Q9Y5Z6 326 aa16■□□□□ 0.15
LMNA-222ENST00000508500 A8MU76 341 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 FECHP22830 423 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 HMGCLP35914 325 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 SIRPB2Q5JXA9 342 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 PDPK2PQ6A1A2 396 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 BBS12Q6ZW61 710 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 PID1Q7Z2X4 250 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 CCDC170Q8IYT3 715 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 RCOR2Q8IZ40 523 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 SLC25A41Q8N5S1 370 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 AGBL5Q8NDL9 886 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 HTR3CQ8WXA8 447 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 JPH3Q8WXH2 748 aaPredicted RBP15.99■□□□□ 0.15
LMNA-222ENST00000508500 ART4Q93070 314 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 QKIQ96PU8 341 aaKnown RBP eCLIP15.99■□□□□ 0.15
LMNA-222ENST00000508500 VPS35Q96QK1 796 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 DPYSL5Q9BPU6 564 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 HEMGNQ9BXL5 484 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 RAD18Q9NS91 495 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 OGFRQ9NZT2 677 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 CPNE7Q9UBL6 633 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 DUSP10Q9Y6W6 482 aa15.99■□□□□ 0.15
LMNA-222ENST00000508500 KIR2DS5A0A0G2JLQ3 304 aa15.98■□□□□ 0.15
LMNA-222ENST00000508500 A0A0G2JNG1 304 aa15.98■□□□□ 0.15
LMNA-222ENST00000508500 SOWAHDA6NJG2 315 aa15.98■□□□□ 0.15
LMNA-222ENST00000508500 EFCAB7A8K855 629 aa15.98■□□□□ 0.15
LMNA-222ENST00000508500 CYSRT1A8MQ03 144 aa15.98■□□□□ 0.15
LMNA-222ENST00000508500 B8ZZF3 427 aa15.98■□□□□ 0.15
LMNA-222ENST00000508500 KIR2DS3K7RE56 304 aa15.98■□□□□ 0.15
LMNA-222ENST00000508500 GAPDHSO14556 408 aaPredicted RBP15.98■□□□□ 0.15
LMNA-222ENST00000508500 GPR39O43194 453 aa15.98■□□□□ 0.15
LMNA-222ENST00000508500 DUX1O43812 170 aa15.98■□□□□ 0.15
LMNA-222ENST00000508500 EPOP01588 193 aa15.98■□□□□ 0.15
LMNA-222ENST00000508500 BRAFP15056 766 aa15.98■□□□□ 0.15
LMNA-222ENST00000508500 ZNF7P17097 686 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms