RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 SFTPA2Q8IWL1 248 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 SPACA3Q8IXA5 215 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 ARL14Q8N4G2 192 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 LSM14AQ8ND56 463 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 SNRNP27Q8WVK2 155 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 TMEM159Q96B96 161 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 TMEM74Q96NL1 305 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 SMIM14Q96QK8 99 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 GFM1Q96RP9 751 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 WDR24Q96S15 920 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 MLPHQ9BV36 600 aaPredicted RBP7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 RIOK2Q9BVS4 552 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 TRIM5Q9C035 493 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 B3GNT4Q9C0J1 378 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 STRADBQ9C0K7 418 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 SLC25A51Q9H1U9 297 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 FAM83DQ9H4H8 585 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 MAGEE1Q9HCI5 957 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 VPS18Q9P253 973 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 LRIT1Q9P2V4 623 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 ACSL6Q9UKU0 697 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 CNOT6Q9ULM6 557 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 SUFUQ9UMX1 484 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 PCDHGA7Q9Y5G6 932 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 HEY1Q9Y5J3 304 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 ST14Q9Y5Y6 855 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 ALG6Q9Y672 507 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 RNF215Q9Y6U7 377 aa7.9□□□□□ -1.14
UBE2D3-222ENST00000508238 PLD2O14939 933 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 ZW10O43264 779 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 MTSS1O43312 755 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 B4GAT1O43505 415 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 SPOPO43791 374 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 CLDN7O95471 211 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 EPOP01588 193 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 KRT1P04264 644 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 MAGEA1P43355 309 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 GNPDA1P46926 289 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 POLD2P49005 469 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 UCNP55089 124 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 INHBCP55103 352 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 CCDC173Q0VFZ6 552 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 AP1B1Q10567 949 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 PRKD1Q15139 912 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 TCEA2Q15560 299 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 TFDP3Q5H9I0 405 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 C3orf38Q5JPI3 329 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 HENMT1Q5T8I9 393 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 MFSD7Q6UXD7 560 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 TMC3Q7Z5M5 1100 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 B3GNT8Q7Z7M8 397 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 NT5DC3Q86UY8 548 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 SLITRK4Q8IW52 837 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 KATNAL2Q8IYT4 538 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 RCOR2Q8IZ40 523 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 LPCAT1Q8NF37 534 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 CCHCR1Q8TD31 782 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 ALKBH8Q96BT7 664 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 EID2BQ96D98 161 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 TEKT5Q96M29 485 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 OR2M4Q96R27 311 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 PANX2Q96RD6 677 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 SRPK1Q96SB4 655 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 AGAP2Q99490 1192 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 RMI1Q9H9A7 625 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 LUC7LQ9NQ29 371 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 NFKBIL1Q9UBC1 381 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 CD84Q9UIB8 345 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 MOSPD1Q9UJG1 213 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 TMEM98Q9Y2Y6 226 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 TTLL3Q9Y4R7 772 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 PCDHA13Q9Y5I0 950 aa7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 GCN1Q92616 2671 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-222ENST00000508238 MYO18BQ8IUG5 2567 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 ATMQ13315 3056 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 C1orf232A0A0U1RR37 186 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 TEX51A0A1B0GUA7 166 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 GOLGA6CA6NDK9 693 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 GOLGA6BA6NDN3 693 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 B4DGG1 531 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 GPR89AB7ZAQ6 455 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 NVLO15381 856 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 CST8O60676 142 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 DNAJC6O75061 913 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 TNFSF15O95150 251 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 ZRANB2O95218 330 aaKnown RBP eCLIP7.88□□□□□ -1.151e-7■■□□□ 13.8
UBE2D3-222ENST00000508238 ECEL1O95672 775 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 CPNE6O95741 557 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 NDST3O95803 873 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 GPR89BP0CG08 455 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 GOLGA6DP0CG33 693 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 ARAFP10398 606 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 PTPN3P26045 913 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 AK4P27144 223 aaPredicted RBP7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 UGT1A5P35504 534 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 FASLGP48023 281 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 DCDC1P59894 354 aa7.88□□□□□ -1.15
UBE2D3-222ENST00000508238 SRSF11Q05519 484 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms