RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 COILP38432 576 aaPredicted RBP19.1■□□□□ 0.65
LMNA-221ENST00000506981 VPS41P49754 854 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 CYP1B1Q16678 543 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 INSCQ1MX18 579 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 OGFOD3Q6PK18 319 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 TRAPPC5Q8IUR0 188 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 DDHD1Q8NEL9 900 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 ULK4Q96C45 1275 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 DNAJC1Q96KC8 554 aaKnown RBP19.1■□□□□ 0.65
LMNA-221ENST00000506981 SYNDIG1Q9H7V2 258 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 UGT1A7Q9HAW7 530 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 UGT1A10Q9HAW8 530 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 UGT1A8Q9HAW9 530 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 SPATS2LQ9NUQ6 558 aaKnown RBP19.1■□□□□ 0.65
LMNA-221ENST00000506981 PLEKHM1Q9Y4G2 1056 aa19.1■□□□□ 0.65
LMNA-221ENST00000506981 HEATR9A2RTY3 570 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 GAPDHSO14556 408 aaPredicted RBP19.09■□□□□ 0.65
LMNA-221ENST00000506981 CHUKO15111 745 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 OPA1O60313 960 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 NOBOXO60393 691 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 SLC2A4P14672 509 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 VCLP18206 1134 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 MSH3P20585 1137 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 FNTAP49354 379 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 INSM1Q01101 510 aaPredicted RBP19.09■□□□□ 0.65
LMNA-221ENST00000506981 TMEM115Q12893 351 aaPredicted RBP19.09■□□□□ 0.65
LMNA-221ENST00000506981 GPS1Q13098 491 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 NFATC2Q13469 925 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 TRIP13Q15645 432 aaPredicted RBP19.09■□□□□ 0.65
LMNA-221ENST00000506981 SKIDA1Q1XH10 827 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 GPRC6AQ5T6X5 926 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 TTC27Q6P3X3 843 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 WDR48Q8TAF3 677 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 CCDC74AQ96AQ1 378 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 CAPZA3Q96KX2 299 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 OSGEPL1Q9H4B0 414 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 CASS4Q9NQ75 786 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 NLE1Q9NVX2 485 aaPredicted RBP19.09■□□□□ 0.65
LMNA-221ENST00000506981 TMPRSS11EQ9UL52 423 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 CLCA2Q9UQC9 943 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 KCNK6Q9Y257 313 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 SAR1BQ9Y6B6 198 aa19.09■□□□□ 0.65
LMNA-221ENST00000506981 FAM221BA6H8Z2 402 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 GPR39O43194 453 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 RALBP11234 206 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 GLB1P16278 677 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 MC4RP32245 332 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 SARNPP82979 210 aaKnown RBP19.08■□□□□ 0.64
LMNA-221ENST00000506981 CDK16Q00536 496 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 PLA2G4EQ3MJ16 856 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 KHDC1Q4VXA5 237 aaKnown RBP19.08■□□□□ 0.64
LMNA-221ENST00000506981 PERM1Q5SV97 790 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 CERCAMQ5T4B2 595 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 PAPD7Q5XG87 772 aaKnown RBP19.08■□□□□ 0.64
LMNA-221ENST00000506981 SNX20Q7Z614 316 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 PPHLN1Q8NEY8 458 aaKnown RBP19.08■□□□□ 0.64
LMNA-221ENST00000506981 DCUN1D1Q96GG9 259 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 CCDC3Q9BQI4 270 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 TIMM29Q9BSF4 260 aa19.08■□□□□ 0.64
LMNA-221ENST00000506981 PCYT1BQ9Y5K3 369 aaPredicted RBP19.08■□□□□ 0.64
LMNA-221ENST00000506981 CCDC78A2IDD5 438 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 FAM149AA5PLN7 773 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 RHPN2P1A8MT19 583 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 CFAP99D6REC4 459 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 H7C0S8 307 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 CCL22O00626 93 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 ZW10O43264 779 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 SNX2O60749 519 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 ECEL1O95672 775 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 MT-CO3P00414 261 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 ZNF7P17097 686 aaPredicted RBP19.07■□□□□ 0.64
LMNA-221ENST00000506981 TPSB2P20231 275 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 ADRA1DP25100 572 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 GRIA1P42261 906 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 PAFAH1B1P43034 410 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 MAZP56270 477 aaKnown RBP19.07■□□□□ 0.64
LMNA-221ENST00000506981 XIAPP98170 497 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 HLTFQ14527 1009 aaKnown RBP eCLIP19.07■□□□□ 0.64
LMNA-221ENST00000506981 TPSAB1Q15661 275 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 GPR33Q49SQ1 333 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 CCDC38Q502W7 563 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 ZRANB3Q5FWF4 1079 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 CCNI2Q6ZMN8 369 aaPredicted RBP19.07■□□□□ 0.64
LMNA-221ENST00000506981 NLRP9Q7RTR0 991 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 ZNF514Q96K75 400 aaPredicted RBP19.07■□□□□ 0.64
LMNA-221ENST00000506981 DEPDC7Q96QD5 511 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 RANBP9Q96S59 729 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 STN1Q9H668 368 aaKnown RBP19.07■□□□□ 0.64
LMNA-221ENST00000506981 KCND1Q9NSA2 647 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 KLC4Q9NSK0 619 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 LRIT1Q9P2V4 623 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 ST14Q9Y5Y6 855 aa19.07■□□□□ 0.64
LMNA-221ENST00000506981 COL27A1Q8IZC6 1860 aaPredicted RBP19.07■□□□□ 0.64
LMNA-221ENST00000506981 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.06■□□□□ 0.64
LMNA-221ENST00000506981 MROH6A6NGR9 719 aa19.06■□□□□ 0.64
LMNA-221ENST00000506981 NUDT21O43809 227 aaKnown RBP19.06■□□□□ 0.64
LMNA-221ENST00000506981 PNLIPP16233 465 aa19.06■□□□□ 0.64
LMNA-221ENST00000506981 TERF1P54274 439 aa19.06■□□□□ 0.64
LMNA-221ENST00000506981 CLDN6P56747 220 aa19.06■□□□□ 0.64
LMNA-221ENST00000506981 SESN2P58004 480 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms