RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 GPR39O43194 453 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 TSPAN3O60637 253 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 SNX2O60749 519 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 VPS4BO75351 444 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 ESRRBO95718 433 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 IGLV3-27P01718 113 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 CDK4P11802 303 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 CKBP12277 381 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 MAGEA11P43364 429 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 GSK3BP49841 420 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 POLR2JP52435 117 aaKnown RBP7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 PLIN5Q00G26 463 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 TIGD2Q4W5G0 525 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 ZRANB3Q5FWF4 1079 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 LCN8Q6JVE9 175 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 AFTPHQ6ULP2 937 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 RSPO2Q6UXX9 243 aaPredicted RBP7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 SPATA19Q7Z5L4 167 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 RALGPS2Q86X27 583 aaPredicted RBP7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 DENND1CQ8IV53 801 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 KIAA2013Q8IYS2 634 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 ADGRG5Q8IZF4 528 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 FNDC5Q8NAU1 212 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 TRPV3Q8NET8 790 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 OR2T11Q8NH01 316 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 MAGEE2Q8TD90 523 aaPredicted RBP7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 FBXL20Q96IG2 436 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 MYRFLQ96LU7 910 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 ADI1Q9BV57 179 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 MUC3BQ9H195 1237 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 SCUBE2Q9NQ36 999 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 UBA2Q9UBT2 640 aaPredicted RBP7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 SEPT3Q9UH03 358 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 EIF2B4Q9UI10 523 aaKnown RBP7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 ASB1Q9Y576 335 aa7.56□□□□□ -1.2
PPARGC1A-204ENST00000506055 FAM92AA1XBS5 289 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 FAM155AB1AL88 458 aaPredicted RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 E5RI56 91 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 EI24O14681 340 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 INSIG1O15503 277 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 OR4F21O95013 312 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 PYGLP06737 847 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 UROSP10746 265 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 HOXD9P28356 352 aaPredicted RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 MC4RP32245 332 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 CDK9P50750 372 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 CCT8P50990 548 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 OXCT1P55809 520 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 IL2P60568 153 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 RING1Q06587 406 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 BTG3Q14201 252 aaPredicted RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 RCAN2Q14206 197 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 TAF1AQ15573 450 aaPredicted RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 PABPC1LQ4VXU2 614 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 INTS11Q5TA45 600 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 NANOGP8Q6NSW7 305 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 TAS2R42Q7RTR8 314 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 GPSM1Q86YR5 675 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 OFCC1Q8IZS5 231 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 NKAPQ8N5F7 415 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 OR52B6Q8NGF0 335 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 NUDT8Q8WV74 236 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 LINGO1Q96FE5 620 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 VPS50Q96JG6 964 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 PSKH2Q96QS6 385 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 MGME1Q9BQP7 344 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 C9orf16Q9BUW7 83 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 TRIM54Q9BYV2 358 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 SOX17Q9H6I2 414 aaPredicted RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 NANOGQ9H9S0 305 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 INTS7Q9NVH2 962 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 HCSTQ9UBK5 93 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 SUN2Q9UH99 717 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 FKBPLQ9UIM3 349 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 TRMT6Q9UJA5 497 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 PCTPQ9UKL6 214 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 OAS3Q9Y6K5 1087 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 SQORQ9Y6N5 450 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 LAMA2P24043 3122 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 MTMR11A4FU01 709 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 SYNCRIPO60506 623 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 VPS26AO75436 327 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 MLYCDO95822 493 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 PRLP01236 227 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 RPS17P08708 135 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 ZFP36L2P47974 494 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 ALDH3B2P48448 385 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 HK3P52790 923 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 ESRRGP62508 458 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 ILF2Q12905 390 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 MBTPS1Q14703 1052 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 TRIM71Q2Q1W2 868 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 C18orf21Q32NC0 220 aaPredicted RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 PLA2G4EQ3MJ16 856 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 LINGO4Q6UY18 593 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 C16orf59Q7L2K0 433 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 GPR141Q7Z602 305 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 CPNE9Q8IYJ1 553 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 ABI1Q8IZP0 508 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 TMEM199Q8N511 208 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms