RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ARMCX3Q9UH62 379 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 SLC24A2Q9UI40 661 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 PA2G4Q9UQ80 394 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 INSL6Q9Y581 213 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 PCDHGA5Q9Y5G8 931 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 STON1Q9Y6Q2 735 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 IGSF1Q8N6C5 1336 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 KIR2DS5A0A0G2JLQ3 304 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 OOEPA6NGQ2 149 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 ENO4A6NNW6 628 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 KIR2DS3K7RE56 304 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 RTCAO00442 366 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 CELF2O95319 508 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 DCTDP32321 178 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 TNFSF8P32971 234 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 PRKCIP41743 596 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 CACNA2D1P54289 1103 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 ACTN3Q08043 901 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 RCN2Q14257 317 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 FAM98BQ52LJ0 330 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 PRAMEF17Q5VTA0 474 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 HIST2H2BCQ6DN03 193 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 HIST2H2BDQ6DRA6 164 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 HEPHL1Q6MZM0 1159 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 DET1Q7L5Y6 550 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 CCDC190Q86UF4 302 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 KLHL7Q8IXQ5 586 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 FAM217AQ8IXS0 508 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 SYCP3Q8IZU3 236 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 SPATA6LQ8N4H0 392 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 ATL1Q8WXF7 558 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 ADAMTS14Q8WXS8 1223 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 TMEM18Q96B42 140 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 HES6Q96HZ4 224 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 B3GNT4Q9C0J1 378 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 SPAG4Q9NPE6 437 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 MKKSQ9NPJ1 570 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 NRIP3Q9NQ35 241 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 TAS2R14Q9NYV8 317 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 STK26Q9P289 416 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 ADAM21Q9UKJ8 722 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 CGB1A6NKQ9 187 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 KDM4EB2RXH2 506 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 M0QZ24 198 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZBTB14O43829 449 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 GBAP04062 536 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZFYP08048 801 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 DNASE1P24855 282 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 CDC25CP30307 473 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 AVPR1AP37288 418 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 LIMK1P53667 647 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 NAGLUP54802 743 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 CDH12P55289 794 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 STX1BP61266 288 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 HSPB3Q12988 150 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 SLC9C1Q4G0N8 1177 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 MIDNQ504T8 468 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 PARP10Q53GL7 1025 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 MEX3CQ5U5Q3 659 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 PATL1Q86TB9 770 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 MB21D2Q8IYB1 491 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 FBXO39Q8N4B4 442 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 TEX9Q8N6V9 391 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 OR1J2Q8NGS2 313 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 EXD1Q8NHP7 514 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 PSMA8Q8TAA3 256 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 CEP76Q8TAP6 659 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 BICD2Q8TD16 824 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 ROBO4Q8WZ75 1007 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 LRRC3BQ96PB8 259 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 MS4A10Q96PG2 267 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 ATP6V0BQ99437 205 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 DDOQ99489 341 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 ABHD6Q9BV23 337 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 DUSP26Q9BV47 211 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 NPFFR1Q9GZQ6 430 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 PPIL3Q9H2H8 161 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 ACSS1Q9NUB1 689 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 EPS15L1Q9UBC2 864 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 STK39Q9UEW8 545 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 RCOR1Q9UKL0 485 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 AGO2Q9UKV8 859 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 TTC7AQ9ULT0 858 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 SNX7Q9UNH6 387 aa3.87□□□□□ -1.79
TRAPPC13-208ENST00000505553 FNDC1Q4ZHG4 1894 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 A0A0B4J293 547 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 TMEM8BA6NDV4 472 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 STMND1H3BQB6 276 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 SLC33A1O00400 549 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 TSPAN1O60635 241 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 KINO60870 393 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 RTN2O75298 545 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 CLDN7O95471 211 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 VIMP08670 466 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 OR52Z1P0C646 297 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 MAOAP21397 527 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 PTPN3P26045 913 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 ME1P48163 572 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 TUBA4AP68366 448 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms