RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 FUT11Q495W5 492 aa13.14□□□□□ -0.31
CCSER1-205ENST00000505073 LY6G5CQ5SRR4 150 aa13.14□□□□□ -0.31
CCSER1-205ENST00000505073 TRIM67Q6ZTA4 783 aa13.14□□□□□ -0.31
CCSER1-205ENST00000505073 OR4K2Q8NGD2 314 aa13.14□□□□□ -0.31
CCSER1-205ENST00000505073 STYXQ8WUJ0 223 aa13.14□□□□□ -0.31
CCSER1-205ENST00000505073 KCTD4Q8WVF5 259 aa13.14□□□□□ -0.31
CCSER1-205ENST00000505073 IRF7Q92985 503 aa13.14□□□□□ -0.31
CCSER1-205ENST00000505073 SAMD11Q96NU1 681 aa13.14□□□□□ -0.31
CCSER1-205ENST00000505073 PHF12Q96QT6 1004 aa13.14□□□□□ -0.31
CCSER1-205ENST00000505073 UNKQ9C0B0 810 aaKnown RBP13.14□□□□□ -0.31
CCSER1-205ENST00000505073 NKX2-4Q9H2Z4 354 aa13.14□□□□□ -0.31
CCSER1-205ENST00000505073 BLOC1S6Q9UL45 172 aa13.14□□□□□ -0.31
CCSER1-205ENST00000505073 TRIM24O15164 1050 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 MAGEB3O15480 346 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 SLC35E2BP0CK96 405 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 CTPS1P17812 591 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 HADHAP40939 763 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 LEPRP48357 1165 aaKnown RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 CSRP3P50461 194 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 CDK9P50750 372 aaKnown RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 ZNF140P52738 457 aaPredicted RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 SEMA3AQ14563 771 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 DGKKQ5KSL6 1271 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 PDE12Q6L8Q7 609 aaKnown RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 KIAA0408Q6ZU52 694 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 CHERPQ8IWX8 916 aaKnown RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 SPATA6LQ8N4H0 392 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 ST13P5Q8NFI4 369 aaPredicted RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 TSPAN14Q8NG11 270 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 SNRNP27Q8WVK2 155 aaKnown RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 MYLIPQ8WY64 445 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 CDKN2AIPNLQ96HQ2 116 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 BIRC8Q96P09 236 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 LRRC3BQ96PB8 259 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 ADGRE3Q9BY15 652 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 PBX4Q9BYU1 374 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 SPHK2Q9NRA0 654 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 TBCCD1Q9NVR7 557 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 CNOT11Q9UKZ1 510 aaKnown RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 PCDHGA4Q9Y5G9 962 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 C5orf42Q9H799 3197 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 ATG2AQ2TAZ0 1938 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 TMEM114B3SHH9 223 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 BNIP3LO60238 219 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 ZNF821O75541 412 aaPredicted RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 TYRP14679 529 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 RYBPQ8N488 228 aaPredicted RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 NAT16Q8N8M0 369 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 VN1R2Q8NFZ6 395 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 RP9Q8TA86 221 aaKnown RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 HSPBAP1Q96EW2 488 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 CCT7Q99832 543 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 OMDQ99983 421 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 APOL5Q9BWW9 433 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 C1QTNF1Q9BXJ1 281 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 BPIFA1Q9NP55 256 aa13.13□□□□□ -0.31
CCSER1-205ENST00000505073 FNDC3AQ9Y2H6 1198 aaKnown RBP13.13□□□□□ -0.31
CCSER1-205ENST00000505073 A0A1B0GTW7 788 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 EPOPA6NHQ4 379 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 ZNF197O14709 1029 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 CD3EAPO15446 510 aaKnown RBP13.12□□□□□ -0.31
CCSER1-205ENST00000505073 GLP2RO95838 553 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 S1PR4O95977 384 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 SRCP12931 536 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 CD1EP15812 388 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 STMN1P16949 149 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 GLRBP48167 497 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 PLK1P53350 603 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 PKNOX1P55347 436 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 RAB10P61026 200 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 MS4A2Q01362 244 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 CEACAM7Q14002 265 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 TAF1AQ15573 450 aaPredicted RBP13.12□□□□□ -0.31
CCSER1-205ENST00000505073 DHRS4L2Q6PKH6 230 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 CROCCP3Q8IVE0 287 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 PGAM4Q8N0Y7 254 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 TMEM102Q8N9M5 508 aaPredicted RBP13.12□□□□□ -0.31
CCSER1-205ENST00000505073 RCN3Q96D15 328 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 OLFM1Q99784 485 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 NLE1Q9NVX2 485 aaPredicted RBP13.12□□□□□ -0.31
CCSER1-205ENST00000505073 CRYL1Q9Y2S2 319 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 SLC22A2O15244 555 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 FZD6O60353 706 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 BCAS2O75934 225 aaPredicted RBP13.12□□□□□ -0.31
CCSER1-205ENST00000505073 ALPIP09923 528 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 ALDH3B2P48448 385 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 AP1S1P61966 158 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 SLC12A1Q13621 1099 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 NAPRTQ6XQN6 538 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 CENPLQ8N0S6 344 aaPredicted RBP13.12□□□□□ -0.31
CCSER1-205ENST00000505073 TRIML2Q8N7C3 387 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 OR4L1Q8NH43 312 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 MYO19Q96H55 970 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 KLHL32Q96NJ5 620 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 CATSPERZQ9NTU4 200 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 POLR3BQ9NW08 1133 aaPredicted RBP13.12□□□□□ -0.31
CCSER1-205ENST00000505073 DPP7Q9UHL4 492 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 RUVBL2Q9Y230 463 aaKnown RBP13.12□□□□□ -0.31
CCSER1-205ENST00000505073 SH3GLB1Q9Y371 365 aa13.12□□□□□ -0.31
CCSER1-205ENST00000505073 C2orf81A6NN90 581 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms