RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 VPS9D1Q9Y2B5 631 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 CRYL1Q9Y2S2 319 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 DMXL2Q8TDJ6 3036 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 LAMA5O15230 3695 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 IGF2RP11717 2491 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 SMG1Q96Q15 3661 aaKnown RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 A0A1W2PP55 124 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 A0A1W2PQF6 199 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 PSMD11O00231 422 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 GAPDHSO14556 408 aaPredicted RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 AREL1O15033 823 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 PRPF4O43172 522 aaKnown RBP eCLIP9.28□□□□□ -0.92
TPM3-218ENST00000505010 PHGDHO43175 533 aaKnown RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 LZTS3O60299 673 aaPredicted RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 RNASEH2AO75792 299 aaKnown RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 DNTTP04053 509 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 MPOP05164 745 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 CHN1P15882 459 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 FMO4P31512 558 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 DRD3P35462 400 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 MAGEA12P43365 314 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 NOVA1P51513 510 aaKnown RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 DCDC1P59894 354 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 SLC18A2Q05940 514 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 NFATC2Q13469 925 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 ZNF460Q14592 562 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 SEPT7Q16181 437 aaKnown RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 DBN1Q16643 649 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 ZNF284Q2VY69 593 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 TTC31Q49AM3 519 aaPredicted RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 HSF5Q4G112 596 aaPredicted RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 TAF1BQ53T94 588 aaPredicted RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 HECTD2Q5U5R9 776 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 AGBL4Q5VU57 503 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 KIAA1324Q6UXG2 1013 aaKnown RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 LIPIQ6XZB0 460 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 Q6ZS52 159 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 Q6ZVL8 140 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 RAPH1Q70E73 1250 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 SERPINA9Q86WD7 417 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 BANPQ8N9N5 519 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 ZNF398Q8TD17 642 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 ACMSDQ8TDX5 336 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 CXorf40AQ8TE69 158 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 SCG3Q8WXD2 468 aaKnown RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 LPGAT1Q92604 370 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 ISL2Q96A47 359 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 RAB7BQ96AH8 199 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 ULK4Q96C45 1275 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 TSPAN17Q96FV3 270 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 SGSM3Q96HU1 749 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 TCF12Q99081 682 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 TTC1Q99614 292 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 OMDQ99983 421 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 SPATA16Q9BXB7 569 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 MKRN2Q9H000 416 aaKnown RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 CCDC68Q9H2F9 335 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 FAM83DQ9H4H8 585 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 MLXIPLQ9NP71 852 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 SSU72Q9NP77 194 aaKnown RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 CORO1CQ9ULV4 474 aaPredicted RBP9.28□□□□□ -0.92
TPM3-218ENST00000505010 MMP17Q9ULZ9 603 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 COQ6Q9Y2Z9 468 aa9.28□□□□□ -0.92
TPM3-218ENST00000505010 DSPP15924 2871 aaKnown RBP9.27□□□□□ -0.92
TPM3-218ENST00000505010 PIKFYVEQ9Y2I7 2098 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 NBEAQ8NFP9 2946 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 LOC400499M0QZD8 3231 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 A0A096LPK6 155 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TCRBV21S2A2A0A5A6 115 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 RGSL1A5PLK6 1076 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 WNT9AO14904 365 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TYROBPO43914 113 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 MMP20O60882 483 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 GLRA3O75311 464 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 PCDH8O95206 1070 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 EPN2O95208 641 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 ZWINTO95229 277 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TOP3BO95985 862 aaKnown RBP9.27□□□□□ -0.93
TPM3-218ENST00000505010 C6P13671 934 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 STMN1P16949 149 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 UGT1A6P19224 532 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 SPINK2P20155 84 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 UGT1A1P22309 533 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 UGT1A4P22310 534 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 ACRV1P26436 265 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 HOXA6P31267 233 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 RPA3P35244 121 aaPredicted RBP9.27□□□□□ -0.93
TPM3-218ENST00000505010 UGT1A3P35503 534 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 UGT1A5P35504 534 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 GMPRP36959 345 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 PPARGP37231 505 aaPredicted RBP9.27□□□□□ -0.93
TPM3-218ENST00000505010 POLD2P49005 469 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TAS2R39P59534 338 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 RAB10P61026 200 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 IRF9Q00978 393 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 POU4F1Q01851 419 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 GUCY1A3Q02108 690 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 CCDC15Q0P6D6 951 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 ILF2Q12905 390 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms