RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 CRTC3Q6UUV7 619 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 NLRP9Q7RTR0 991 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 SNX20Q7Z614 316 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 PIP4P1Q86T03 277 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 GALNT13Q8IUC8 556 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 PIANPQ8IYJ0 282 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 NOA1Q8NC60 698 aaKnown RBP16.31■□□□□ 0.2
SCLT1-205ENST00000503401 OR6P1Q8NGX9 317 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 SCARF2Q96GP6 870 aaPredicted RBP16.31■□□□□ 0.2
SCLT1-205ENST00000503401 C19orf43Q9BQ61 176 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 LRRC1Q9BTT6 524 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 TUBB2BQ9BVA1 445 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 KIFC1Q9BW19 673 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 TREX1Q9NSU2 369 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 SMOXQ9NWM0 555 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 VPS18Q9P253 973 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 PCOLCE2Q9UKZ9 415 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 SOX13Q9UN79 622 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 PIKFYVEQ9Y2I7 2098 aa16.31■□□□□ 0.2
SCLT1-205ENST00000503401 CTAGE15A4D2H0 777 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 SDR42E2A6NKP2 422 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 GIPC1O14908 333 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 NUAK1O60285 661 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 CDK14O94921 469 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 GOT2P00505 430 aaKnown RBP16.3■□□□□ 0.2
SCLT1-205ENST00000503401 CTAGE8P0CG41 777 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 MYF5P13349 255 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 AK4P27144 223 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-205ENST00000503401 AKT1P31749 480 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 ACVR1Q04771 509 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 TMEM115Q12893 351 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-205ENST00000503401 TRADDQ15628 312 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 PLA2G4EQ3MJ16 856 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 C8orf74Q6P047 294 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 DET1Q7L5Y6 550 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 TAS2R42Q7RTR8 314 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 CTAGE6Q86UF2 777 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 CTAGE4Q8IX94 777 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 DDHD1Q8NEL9 900 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 OR2M4Q96R27 311 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 RTKNQ9BST9 563 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 DLL3Q9NYJ7 618 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 SAMD15Q9P1V8 674 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 ANAPC5Q9UJX4 755 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 RIMKLBQ9ULI2 386 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 MAD1L1Q9Y6D9 718 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 NEMP2A6NFY4 417 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 AGAP14A8MT82 685 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 YY2O15391 372 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 SIGLEC6O43699 453 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 CBFA2T3O75081 653 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 FOXN2P32314 431 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 PRAMEP78395 509 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 CACNG1Q06432 222 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 DHX9Q08211 1270 aaKnown RBP16.3■□□□□ 0.2
SCLT1-205ENST00000503401 ELOCQ15369 112 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 HP1BP3Q5SSJ5 553 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-205ENST00000503401 LDLRAP1Q5SW96 308 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 DUPD1Q68J44 220 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 CHST15Q7LFX5 561 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-205ENST00000503401 TAF8Q7Z7C8 310 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 SERPINA9Q86WD7 417 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 NXPE1Q8N323 547 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 RASGEF1AQ8N9B8 481 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 MNS1Q8NEH6 495 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 SIGLEC10Q96LC7 697 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 CARD6Q9BX69 1037 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 IL1RAPL1Q9NZN1 696 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 DOLKQ9UPQ8 538 aa16.3■□□□□ 0.2
SCLT1-205ENST00000503401 UTP11Q9Y3A2 253 aaKnown RBP16.3■□□□□ 0.2
SCLT1-205ENST00000503401 OR2AG2A6NM03 316 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 ESPNB1AK53 854 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 GOLGA8KD6RF30 607 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 LMO7DNF2Z398 122 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 GOLGA8TH3BQL2 631 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 GRID2O43424 1007 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 ANXA6P08133 673 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 ACP5P13686 325 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 CTSCP53634 463 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 B4GALNT1Q00973 533 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 CTBSQ01459 385 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 INAVAQ3KP66 663 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 BBS9Q3SYG4 887 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 SLC30A9Q6PML9 568 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 AFTPHQ6ULP2 937 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 NRROSQ86YC3 692 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 TRAPPC5Q8IUR0 188 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 ZNF547Q8IVP9 402 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 SFTPA2Q8IWL1 248 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 FSTL5Q8N475 847 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-205ENST00000503401 OR4L1Q8NH43 312 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 OR4C6Q8NH72 309 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 TTC25Q96NG3 672 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 FCRL3Q96P31 734 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-205ENST00000503401 BOCQ9BWV1 1114 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 MRM3Q9HC36 420 aaKnown RBP16.29■□□□□ 0.2
SCLT1-205ENST00000503401 NLGN3Q9NZ94 848 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 CSNK1G3Q9Y6M4 447 aa16.29■□□□□ 0.2
SCLT1-205ENST00000503401 TRBV5-4A0A0C4DH59 114 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 ESYT3A0FGR9 886 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms