RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 LNPEPQ9UIQ6 1025 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 DIAPH2O60879 1101 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 TSPAN12O95859 305 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 CA5AP35218 305 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 HERVK_113P63132 956 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 ZNF678Q5SXM1 525 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 MACC1Q6ZN28 852 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 FRMD7Q6ZUT3 714 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 TTC7BQ86TV6 843 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 YAF2Q8IY57 180 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 PDLIM5Q96HC4 596 aaKnown RBP21.8■■□□□ 1.08
PTPN13-205ENST00000502971 PRR11Q96HE9 360 aaPredicted RBP21.8■■□□□ 1.08
PTPN13-205ENST00000502971 GAS2L1Q99501 681 aaPredicted RBP21.8■■□□□ 1.08
PTPN13-205ENST00000502971 ERVK-6Q9BXR3 956 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 LRMDAQ9H2I8 198 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 MTG2Q9H4K7 406 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 RAD18Q9NS91 495 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 ZDHHC3Q9NYG2 299 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 RNF112Q9ULX5 631 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 TMCO1Q9UM00 188 aa21.8■■□□□ 1.08
PTPN13-205ENST00000502971 MTHFD2P13995 350 aa21.79■■□□□ 1.08
PTPN13-205ENST00000502971 NQO1P15559 274 aaKnown RBP21.79■■□□□ 1.08
PTPN13-205ENST00000502971 CALB2P22676 271 aa21.79■■□□□ 1.08
PTPN13-205ENST00000502971 ALDH18A1P54886 795 aaKnown RBP21.79■■□□□ 1.08
PTPN13-205ENST00000502971 AGR3Q8TD06 166 aa21.79■■□□□ 1.08
PTPN13-205ENST00000502971 DTX3LQ8TDB6 740 aa21.79■■□□□ 1.08
PTPN13-205ENST00000502971 PTCD3Q96EY7 689 aaKnown RBP21.79■■□□□ 1.08
PTPN13-205ENST00000502971 LINGO1Q96FE5 620 aa21.79■■□□□ 1.08
PTPN13-205ENST00000502971 BOCQ9BWV1 1114 aa21.79■■□□□ 1.08
PTPN13-205ENST00000502971 PCDH12Q9NPG4 1184 aa21.79■■□□□ 1.08
PTPN13-205ENST00000502971 ARL8BQ9NVJ2 186 aa21.79■■□□□ 1.08
PTPN13-205ENST00000502971 PRRC2BQ5JSZ5 2229 aaKnown RBP21.78■■□□□ 1.08
PTPN13-205ENST00000502971 EDDM13A0A1B0GTR0 161 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 CAPN14A8MX76 684 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 UBXN8O00124 270 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 SOX1O00570 391 aaPredicted RBP21.78■■□□□ 1.08
PTPN13-205ENST00000502971 PRNPP04156 253 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 XPAP23025 273 aaPredicted RBP21.78■■□□□ 1.08
PTPN13-205ENST00000502971 NSG1P42857 185 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 KDSRQ06136 332 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 RUNX3Q13761 415 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 COL19A1Q14993 1142 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 FNDC3BQ53EP0 1204 aaKnown RBP21.78■■□□□ 1.08
PTPN13-205ENST00000502971 VWA5B1Q5TIE3 1220 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 METTL21CQ5VZV1 264 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 CES5AQ6NT32 575 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 CPNE9Q8IYJ1 553 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 AFAP1L2Q8N4X5 818 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 PTGR2Q8N8N7 351 aaPredicted RBP21.78■■□□□ 1.08
PTPN13-205ENST00000502971 EEF1AKMT1Q8WVE0 214 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 FAR2Q96K12 515 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 ASB2Q96Q27 587 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 CCDC106Q9BWC9 280 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 GSTO2Q9H4Y5 243 aa21.78■■□□□ 1.08
PTPN13-205ENST00000502971 RGSL1A5PLK6 1076 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 C16orf96A6NNT2 1141 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 IQCF5A8MTL0 148 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 BTN3A1O00481 513 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 GRID2O43424 1007 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 DCDC1P59894 354 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 NAA20P61599 178 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 MESP2Q0VG99 397 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 ADGRE1Q14246 886 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 TSNQ15631 228 aaKnown RBP21.77■■□□□ 1.08
PTPN13-205ENST00000502971 HNRNPA1L2Q32P51 320 aaKnown RBP21.77■■□□□ 1.08
PTPN13-205ENST00000502971 UNC50Q53HI1 259 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 LRRC73Q5JTD7 316 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 DPPA4Q7L190 304 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 PHTF2Q8N3S3 785 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 TERB1Q8NA31 727 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 UCMAQ8WVF2 138 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 EXT2Q93063 718 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 FUBP1Q96AE4 644 aaKnown RBP21.77■■□□□ 1.08
PTPN13-205ENST00000502971 ELSPBP1Q96BH3 223 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 SLC7A6OSQ96CW6 309 aaPredicted RBP21.77■■□□□ 1.08
PTPN13-205ENST00000502971 SARS2Q9NP81 518 aaKnown RBP21.77■■□□□ 1.08
PTPN13-205ENST00000502971 ARMCX1Q9P291 453 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 PRSS21Q9Y6M0 314 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 SUPT3HB4E1H0 165 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 CDC7O00311 574 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 SUPT3HO75486 399 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 GFAPP14136 432 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 PSMC3P17980 439 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 ATP13A5Q4VNC0 1218 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 SLC9B1Q4ZJI4 515 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 SH2D4BQ5SQS7 431 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 ERAP2Q6P179 960 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 ZNF366Q8N895 744 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 TMIEQ8NEW7 156 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 ST13P5Q8NFI4 369 aaPredicted RBP21.77■■□□□ 1.08
PTPN13-205ENST00000502971 MAPK15Q8TD08 544 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 MYADMQ96S97 322 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 COPS8Q99627 209 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 SHCBP1LQ9BZQ2 653 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 SLC40A1Q9NP59 571 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 NFKBIL1Q9UBC1 381 aaPredicted RBP21.77■■□□□ 1.08
PTPN13-205ENST00000502971 IKZF3Q9UKT9 509 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 TRIM33Q9UPN9 1127 aa21.77■■□□□ 1.08
PTPN13-205ENST00000502971 NPEPPSL1A6NEC2 478 aa21.76■■□□□ 1.07
PTPN13-205ENST00000502971 KLK8O60259 260 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms