RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 PLEKHG4BQ96PX9 1271 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 SLC38A3Q99624 504 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 DPYSL5Q9BPU6 564 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 HERPUD2Q9BSE4 406 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 HEMGNQ9BXL5 484 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 FSD1LQ9BXM9 530 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ZMYND15Q9H091 742 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 OR2AG1Q9H205 316 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 TRABDQ9H4I3 376 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 TRIM39Q9HCM9 518 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 BPIFA1Q9NP55 256 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 WDR70Q9NW82 654 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 HACD3Q9P035 362 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 TBC1D29Q9UFV1 150 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 RSPH14Q9UHP6 348 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ACSL6Q9UKU0 697 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 TRHDEQ9UKU6 1024 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 EFR3BQ9Y2G0 817 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 REXO2Q9Y3B8 237 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 PCDHA3Q9Y5H8 950 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 SPO11Q9Y5K1 396 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ADGRG1Q9Y653 693 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 DUSP10Q9Y6W6 482 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ITPR1Q14643 2758 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 KIR2DS5A0A0G2JLQ3 304 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 PRAMEF33A0A0G2JMD5 474 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 A0A0G2JNG1 304 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 IGHV5-10-1A0A0J9YXX1 117 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 MACROD2A1Z1Q3 448 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 OR5K4A6NMS3 321 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 K7ENP7 123 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 KIR2DS3K7RE56 304 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CHUKO15111 745 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 KMOO15229 486 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 PJA2O43164 708 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 DUX1O43812 170 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 VEGFDO43915 354 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 SNX2O60749 519 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 PRAMEF10O60809 474 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 MTX2O75431 263 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 LIPCP11150 499 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 F3P13726 295 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 HLA-DPA1P20036 260 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CTNNA2P26232 953 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CSF2RBP32927 897 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CETN2P41208 172 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CHRNA4P43681 627 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CLCNKAP51800 687 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 VAV2P52735 878 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 GEMP55040 296 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 RWDD2BP57060 319 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 OTUD4Q01804 1114 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 RHDQ02161 417 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CFHR1Q03591 330 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 SQSTM1Q13501 440 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 COL9A2Q14055 689 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 KIR2DS5Q14953 304 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 SLC1A5Q15758 541 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 INSCQ1MX18 579 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 PLA2G4EQ3MJ16 856 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 SIRPB2Q5JXA9 342 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 TMEM164Q5U3C3 297 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 ZDHHC20Q5W0Z9 365 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 ITPRIPL1Q6GPH6 555 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 TMEM71Q6P5X7 295 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 IYDQ6PHW0 289 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 INO80CQ6PI98 192 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CRTC3Q6UUV7 619 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CCDC81Q6ZN84 652 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 GLT6D1Q7Z4J2 308 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 KIAA1328Q86T90 577 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 LRRTM4Q86VH4 590 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 GAS2L3Q86XJ1 694 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 ZNF761Q86XN6 746 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 SLC25A41Q8N5S1 370 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 ACRBPQ8NEB7 543 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 IPMKQ8NFU5 416 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 OR10G6Q8NH81 332 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 BLOC1S5Q8TDH9 187 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 USP7Q93009 1102 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 SH3KBP1Q96B97 665 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 OXNAD1Q96HP4 312 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 MRGPRX2Q96LB1 330 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 VPS35Q96QK1 796 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CCNL2Q96S94 520 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 BAG1Q99933 345 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 FERMT1Q9BQL6 677 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 OSBPL8Q9BZF1 889 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 LACRTQ9GZZ8 138 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 GBA3Q9H227 469 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 OSGEPL1Q9H4B0 414 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 C10orf88Q9H8K7 445 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 SARS2Q9NP81 518 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 KLC4Q9NSK0 619 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 PTPRQQ9UMZ3 2332 aa8.37□□□□□ -1.07
HMGXB4-207ENST00000498212 CACNA1GO43497 2377 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 LOC400499M0QZD8 3231 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms