RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 BARHL2Q9NY43 387 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 KCND2Q9NZV8 630 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 PGAP2Q9UHJ9 254 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 FBXL2Q9UKC9 423 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 MRPS28Q9Y2Q9 187 aaKnown RBP3.48□□□□□ -1.85
SMC4-227ENST00000497984 PYGO1Q9Y3Y4 419 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 TEX13CA0A0J9YWL9 993 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 A0A1W2PP11 408 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 A0A1W2PQM1 296 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 SH2B2O14492 632 aaPredicted RBP3.47□□□□□ -1.85
SMC4-227ENST00000497984 PDE9AO76083 593 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 POLBP06746 335 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 CEACAM1P13688 526 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 CNTFP26441 200 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 COG7P83436 770 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 GALNT2Q10471 571 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 PTP4A2Q12974 167 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 TUBB2AQ13885 445 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 SIGIRRQ6IA17 410 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 PLEKHM3Q6ZWE6 761 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 ATG9AQ7Z3C6 839 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 NFKBIDQ8NI38 313 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 HTRA1Q92743 480 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 APBB2Q92870 758 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 KLHL29Q96CT2 875 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 MOCOSQ96EN8 888 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 APOPT1Q96IL0 206 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 PSMD1Q99460 953 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 RBM4BQ9BQ04 359 aaKnown RBP3.47□□□□□ -1.85
SMC4-227ENST00000497984 CABLES2Q9BTV7 478 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 TUBB2BQ9BVA1 445 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 SAGE1Q9NXZ1 904 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 PCNX3Q9H6A9 2034 aa3.47□□□□□ -1.85
SMC4-227ENST00000497984 A0A1W2PNU3 283 aaPredicted RBP3.46□□□□□ -1.86
SMC4-227ENST00000497984 OR5K3A6NET4 321 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 A6NL46 340 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 FAM90A26D6RGX4 464 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 LDLRAD4O15165 306 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 TPD52L2O43399 206 aaKnown RBP3.46□□□□□ -1.86
SMC4-227ENST00000497984 NR3C1P04150 777 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 XBP1P17861 261 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 ABCD1P33897 745 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 UBA7P41226 1012 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 MAPK9P45984 424 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 USP41Q3LFD5 358 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 KIAA1644Q3SXP7 199 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 DCST1Q5T197 706 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 INO80CQ6PI98 192 aaPredicted RBP3.46□□□□□ -1.86
SMC4-227ENST00000497984 PHF21AQ96BD5 680 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 HVCN1Q96D96 273 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 ABHD8Q96I13 439 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 KLHL15Q96M94 604 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 LRMDAQ9H2I8 198 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 VEZTQ9HBM0 779 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 LTB4R2Q9NPC1 389 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 JRKLQ9Y4A0 524 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 CYP46A1Q9Y6A2 500 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 ADAMTS9Q9P2N4 1935 aa3.46□□□□□ -1.86
SMC4-227ENST00000497984 DUXAA6NLW8 204 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 DCXO43602 365 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 F9P00740 461 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 IGHV4-38-2P0DP08 117 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 MSH3P20585 1137 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 UGT1A1P22309 533 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 CDAP32320 146 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 ELF1P32519 619 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 PAFAH1B1P43034 410 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 EIF3BP55884 814 aaKnown RBP3.45□□□□□ -1.86
SMC4-227ENST00000497984 MBTD1Q05BQ5 628 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 ACVR2BQ13705 512 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 MYLK3Q32MK0 819 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 KRTCAP3Q53RY4 240 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 C6orf141Q5SZD1 244 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 BSPRYQ5W0U4 402 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 METTL7BQ6UX53 244 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 PLXDC2Q6UX71 529 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 P2RY8Q86VZ1 359 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 TSPYL6Q8N831 410 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 AMER3Q8N944 861 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 FGFBP3Q8TAT2 258 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 RNF125Q96EQ8 232 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 SAAL1Q96ER3 474 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 TBATAQ96M53 351 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 ZBTB20Q9HC78 741 aaPredicted RBP3.45□□□□□ -1.86
SMC4-227ENST00000497984 CCDC177Q9NQR7 707 aaPredicted RBP3.45□□□□□ -1.86
SMC4-227ENST00000497984 GGA3Q9NZ52 723 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 SARDHQ9UL12 918 aa3.45□□□□□ -1.86
SMC4-227ENST00000497984 USP17L23D6RBM5 183 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 ANKRD28O15084 1053 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 SLC22A2O15244 555 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 KCNN4O15554 427 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 TNFSF14O43557 240 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 WISP2O76076 250 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 ZFAND5O76080 213 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 GATA1P15976 413 aaPredicted RBP3.44□□□□□ -1.86
SMC4-227ENST00000497984 MCCP23508 829 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 GGT5P36269 586 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 CPOXP36551 454 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 GNAQP50148 359 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms