RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 FGF22Q9HCT0 170 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 ZDHHC3Q9NYG2 299 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 PCDH15Q96QU1 1955 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 TCRBV9S1A1TA0A576 114 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 PRSS38A1L453 326 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 TMEM202A6NGA9 273 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 PFDN6O15212 129 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 PHBP35232 272 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 SLC1A2P43004 574 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 CTSKP43235 329 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 GPX6P59796 221 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 FZD2Q14332 565 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 ITIH4Q14624 930 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 NAA30Q147X3 362 aaPredicted RBP18.15■□□□□ 0.5
TSSC4-210ENST00000496468 TYSND1Q2T9J0 566 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 KHDC1Q4VXA5 237 aaKnown RBP18.15■□□□□ 0.5
TSSC4-210ENST00000496468 HSP90AA5PQ58FG0 334 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 PLA2G2CQ5R387 149 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 ZNF648Q5T619 568 aaPredicted RBP18.15■□□□□ 0.5
TSSC4-210ENST00000496468 SDCCAG8Q86SQ7 713 aaPredicted RBP18.15■□□□□ 0.5
TSSC4-210ENST00000496468 SPATS2Q86XZ4 545 aaKnown RBP18.15■□□□□ 0.5
TSSC4-210ENST00000496468 CILP2Q8IUL8 1156 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 GPR150Q8NGU9 434 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 HEXDCQ8WVB3 486 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 OR2AG1Q9H205 316 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 SMOC1Q9H4F8 434 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 LRRC4CQ9HCJ2 640 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 FSCN3Q9NQT6 498 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 IARS2Q9NSE4 1012 aaKnown RBP18.15■□□□□ 0.5
TSSC4-210ENST00000496468 ZFATQ9P243 1243 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 MOSPD1Q9UJG1 213 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 SLC6A14Q9UN76 642 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 SLC17A4Q9Y2C5 497 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 TMEM98Q9Y2Y6 226 aa18.15■□□□□ 0.5
TSSC4-210ENST00000496468 SDK1Q7Z5N4 2213 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 IGLV3-16A0A075B6K0 115 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 GPR89AB7ZAQ6 455 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 TNFRSF10CO14798 259 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 KHNYNO15037 678 aaKnown RBP18.14■□□□□ 0.49
TSSC4-210ENST00000496468 VEGFDO43915 354 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 ACSL3O95573 720 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 SYPP08247 313 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 GPR89BP0CG08 455 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 PMS2P54278 862 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 NHLH1Q02575 133 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 MGAT5Q09328 741 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 KYNUQ16719 465 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 KIF19Q2TAC6 998 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 TCEAL6Q6IPX3 200 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 ZNF449Q6P9G9 518 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 PACS1Q6VY07 963 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 C3orf62Q6ZUJ4 267 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 MARK2Q7KZI7 788 aaKnown RBP18.14■□□□□ 0.49
TSSC4-210ENST00000496468 ADGRG6Q86SQ4 1221 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 LDB1Q86U70 411 aaPredicted RBP18.14■□□□□ 0.49
TSSC4-210ENST00000496468 CNTN4Q8IWV2 1026 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 RBFAQ8N0V3 343 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 OXR1Q8N573 874 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 OR1E3Q8WZA6 343 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 CDKL2Q92772 493 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 TCEAL3Q969E4 200 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 ZDHHC5Q9C0B5 715 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 TRIM39Q9HCM9 518 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 DNAJC28Q9NX36 388 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 ATXN10Q9UBB4 475 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 RAB21Q9UL25 225 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 VPS9D1Q9Y2B5 631 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 SNX11Q9Y5W9 270 aa18.14■□□□□ 0.49
TSSC4-210ENST00000496468 GON4LQ3T8J9 2241 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 PROB1E7EW31 1015 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 NDUFS3O75489 264 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 CDK14O94921 469 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 RASGRP1O95267 797 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 CEACAM5P06731 702 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 IVLP07476 585 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 POLD2P49005 469 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 SRP54P61011 504 aaKnown RBP18.13■□□□□ 0.49
TSSC4-210ENST00000496468 BNC1Q01954 994 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 PPARDQ03181 441 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 TMEM115Q12893 351 aaPredicted RBP18.13■□□□□ 0.49
TSSC4-210ENST00000496468 EIF2B5Q13144 721 aaKnown RBP18.13■□□□□ 0.49
TSSC4-210ENST00000496468 ALG11Q2TAA5 492 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 EMBQ6PCB8 327 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 IL27RAQ6UWB1 636 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 TRMT10CQ7L0Y3 403 aaKnown RBP18.13■□□□□ 0.49
TSSC4-210ENST00000496468 DET1Q7L5Y6 550 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 GALNT13Q8IUC8 556 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 TRAPPC5Q8IUR0 188 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 DENND6AQ8IWF6 608 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 SCG3Q8WXD2 468 aaKnown RBP18.13■□□□□ 0.49
TSSC4-210ENST00000496468 CCDC97Q96F63 343 aaPredicted RBP18.13■□□□□ 0.49
TSSC4-210ENST00000496468 BOCQ9BWV1 1114 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 RMI1Q9H9A7 625 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 CARS2Q9HA77 564 aaKnown RBP18.13■□□□□ 0.49
TSSC4-210ENST00000496468 MRPL40Q9NQ50 206 aaKnown RBP18.13■□□□□ 0.49
TSSC4-210ENST00000496468 INTS10Q9NVR2 710 aaKnown RBP18.13■□□□□ 0.49
TSSC4-210ENST00000496468 MOCS1Q9NZB8 636 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 SLC17A6Q9P2U8 582 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 RAPGEFL1Q9UHV5 662 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 SUFUQ9UMX1 484 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms