RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 DGKAP23743 735 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 CPA2P48052 419 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 NUMBP49757 651 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 RAP1GDS1P52306 607 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 CDKN2DP55273 166 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 DLG1Q12959 904 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 STX5Q13190 355 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 ART3Q13508 389 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 UBAP2LQ14157 1087 aaKnown RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 NUMA1Q14980 2115 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 E2F5Q15329 346 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 TEAD2Q15562 447 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 MMEL1Q495T6 779 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 SLC9B1Q4ZJI4 515 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 ZNF789Q5FWF6 425 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 TMEM240Q5SV17 173 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 ZNF678Q5SXM1 525 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 ATXN7L2Q5T6C5 722 aaPredicted RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 C1orf146Q5VVC0 180 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 NAPRTQ6XQN6 538 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 RINLQ6ZS11 566 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 TPRG1Q6ZUI0 275 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 LYSMD3Q7Z3D4 306 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 LDB1Q86U70 411 aaPredicted RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 C7orf61Q8IZ16 206 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 APCDD1Q8J025 514 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 CLYBLQ8N0X4 340 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 CBARPQ8N350 705 aaPredicted RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 TTC30BQ8N4P2 665 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 CELF5Q8N6W0 485 aaKnown RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 PTGR2Q8N8N7 351 aaPredicted RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 MRPL43Q8N983 215 aaKnown RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 ACVR1CQ8NER5 493 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 OR56A4Q8NGH8 313 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 ACTRT2Q8TDY3 377 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 BHMTQ93088 406 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 PHF21BQ96EK2 531 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 LINGO1Q96FE5 620 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 ZNF641Q96N77 438 aaPredicted RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 GPR78Q96P69 363 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 SLC22A12Q96S37 553 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 GPR21Q99679 349 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 CCT7Q99832 543 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 THTPAQ9BU02 230 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 NUSAP1Q9BXS6 441 aaKnown RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 OSBPL1AQ9BXW6 950 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 CADM1Q9BY67 442 aaKnown RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 LRRC3Q9BY71 257 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 FAM126AQ9BYI3 521 aaPredicted RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 CPEB1Q9BZB8 566 aaKnown RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 NUF2Q9BZD4 464 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 C20orf27Q9GZN8 174 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 ZDHHC6Q9H6R6 413 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 ASB8Q9H765 288 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 SUDS3Q9H7L9 328 aaPredicted RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 ZNF395Q9H8N7 513 aaPredicted RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 SARS2Q9NP81 518 aaKnown RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 SPHK2Q9NRA0 654 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 RIC8BQ9NVN3 520 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 TAS2R1Q9NYW7 299 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 CD274Q9NZQ7 290 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 IL17CQ9P0M4 197 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 DNMT3BQ9UBC3 853 aaKnown RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 PRPF19Q9UMS4 504 aaKnown RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 FAM50BQ9Y247 325 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 HS3ST2Q9Y278 367 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 FNDC3AQ9Y2H6 1198 aaKnown RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 FIS1Q9Y3D6 152 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 KCTD3Q9Y597 815 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 SPO11Q9Y5K1 396 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 TNPO3Q9Y5L0 923 aaKnown RBP6.87□□□□□ -1.31
USP39-219ENST00000496047 OR51B4Q9Y5P0 310 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 ACTL7AQ9Y615 435 aa6.87□□□□□ -1.31
USP39-219ENST00000496047 RGSL1A5PLK6 1076 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 NPEPPSL1A6NEC2 478 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 BBIP1A8MTZ0 92 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 C5orf67F2Z3F1 127 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 EIF3FO00303 357 aaPredicted RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 KPNA5O15131 536 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 UBDO15205 165 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 ZBTB14O43829 449 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 BNIP3LO60238 219 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 GREM1O60565 184 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 GJB3O75712 270 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 CSPG5O95196 566 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 WISP3O95389 354 aaPredicted RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 NFATC1O95644 943 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 PRLP01236 227 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 SRPRAP08240 638 aaKnown RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 PDHA1P08559 390 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 OR56A5P0C7T3 313 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 CBSLP0DN79 551 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 SRCP12931 536 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 CTPS1P17812 591 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 ITGB8P26012 769 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 PIK3R1P27986 724 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 CD70P32970 193 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 CBSP35520 551 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 ARL1P40616 181 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms