RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 NT5C1BQ96P26 610 aa9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 FCRL4Q96PJ5 515 aa9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 USP28Q96RU2 1077 aa9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 INSM2Q96T92 566 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 WDR77Q9BQA1 342 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 RSRP1Q9BUV0 290 aa9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 TEX101Q9BY14 249 aa9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 TSPAN10Q9H1Z9 355 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 AKIRIN1Q9H9L7 192 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 WASH6PQ9NQA3 447 aa9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 STAP1Q9ULZ2 295 aa9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 SLC17A4Q9Y2C5 497 aa9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 COQ4Q9Y3A0 265 aa9.48□□□□□ -0.89
SMARCAL1-213ENST00000496037 LILRA5A6NI73 299 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 I6L893 689 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 CCL21O00585 134 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 KLRC4O43908 158 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 ZNF500O60304 480 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 RAMP2O60895 175 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 JRKO75564 520 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 BPNT1O95861 308 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 RPLP1P05386 114 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 AMD1P17707 334 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 SOX5P35711 763 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 TSFMP43897 325 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 MAPKAPK2P49137 400 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 SULT1E1P49888 294 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 DEUP1Q05D60 604 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 CDC16Q13042 620 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 MEA1Q16626 185 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 CACHD1Q5VU97 1274 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 FCRL6Q6DN72 434 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 RAET1GQ6H3X3 334 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 PWWP2BQ6NUJ5 590 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 FAM173BQ6P4H8 233 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 PRSS42Q7Z5A4 293 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 DNAAF5Q86Y56 855 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 GALNT13Q8IUC8 556 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 CEP57L1Q8IYX8 460 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 MYO1HQ8N1T3 1032 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 COG1Q8WTW3 980 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 ZNF641Q96N77 438 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 AGAP3Q96P47 875 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 SLX1AQ9BQ83 275 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 HERPUD2Q9BSE4 406 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 RBSNQ9H1K0 784 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 MAGEH1Q9H213 219 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 OLAHQ9NV23 265 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 PPARGC1AQ9UBK2 798 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 DNAI1Q9UI46 699 aa9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-213ENST00000496037 MAP1AP78559 2803 aaPredicted RBP9.46□□□□□ -0.89
SMARCAL1-213ENST00000496037 FIGNL2A6NMB9 653 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 TMEM229AB2RXF0 380 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 KDELR3O43731 214 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 UBXN7O94888 489 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 EML2O95834 649 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 SCGB1D2O95969 90 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 KLK3P07288 261 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 KRT5P13647 590 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 FOSL1P15407 271 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 TYRP1P17643 537 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 KCNK10P57789 538 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 OTUD4Q01804 1114 aaKnown RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 SKOR2Q2VWA4 1001 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 INO80DQ53TQ3 878 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 OTUD1Q5VV17 481 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 AFMIDQ63HM1 303 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 RWDD4Q6NW29 188 aaKnown RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 DUS1LQ6P1R4 473 aaKnown RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 C11orf57Q6ZUT1 292 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 FAM183BPQ6ZVS7 135 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 MARK2Q7KZI7 788 aaKnown RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 DPPA4Q7L190 304 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 GRAMD1CQ8IYS0 662 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 GALNT16Q8N428 558 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 ZBTB2Q8N680 514 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 BCORP1Q8N888 145 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 SIDT2Q8NBJ9 832 aaKnown RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 NETO2Q8NC67 525 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 MTFMTQ96DP5 389 aaKnown RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 INTS4Q96HW7 963 aaKnown RBP9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 TMX3Q96JJ7 454 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 FER1L6-AS2Q96M78 137 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 CHST8Q9H2A9 424 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 TMEM51Q9NW97 253 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 KCTD5Q9NXV2 234 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 TCFL5Q9UL49 500 aa9.46□□□□□ -0.9
SMARCAL1-213ENST00000496037 NBEAL1Q6ZS30 2694 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 KIR2DS5A0A0G2JLQ3 304 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 A0A0G2JNG1 304 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 KIAA1324LA8MWY0 1029 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 A8MX80 341 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 C19orf84I3L1E1 186 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 KIR2DS3K7RE56 304 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 SCRG1O75711 98 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 RAB40ALP0C0E4 278 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 GM2AP17900 193 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 NELFEP18615 380 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 SERPINA4P29622 427 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms