RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 ANKRD12Q6UB98 2062 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 IGLV3-10A0A075B6K4 115 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 PEX12O00623 359 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 ADAM10O14672 748 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 MAP3K7O43318 606 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 SOD1P00441 154 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 ATP1A1P05023 1023 aaKnown RBP8.69□□□□□ -1.02
GARNL3-219ENST00000495172 UNGP13051 313 aaPredicted RBP8.69□□□□□ -1.02
GARNL3-219ENST00000495172 UGT1A4P22310 534 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 ARCN1P48444 511 aaKnown RBP8.69□□□□□ -1.02
GARNL3-219ENST00000495172 RPL34P49207 117 aaKnown RBP8.69□□□□□ -1.02
GARNL3-219ENST00000495172 CASP6P55212 293 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 HSF1Q00613 529 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 CBLBQ13191 982 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 CYTH1Q15438 398 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 CNGA3Q16281 694 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 RAB6CQ53S08 254 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 AGAP7PQ5VUJ5 663 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 HIST2H2BDQ6DRA6 164 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 TMEM26Q6ZUK4 368 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 BEND5Q7L4P6 421 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 GALNT13Q8IUC8 556 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 SPNS2Q8IVW8 549 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 ZZZ3Q8IYH5 903 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 KIAA0895Q8NCT3 520 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 AGAP11Q8TF27 550 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 SH3KBP1Q96B97 665 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 ZNF501Q96CX3 271 aaPredicted RBP8.69□□□□□ -1.02
GARNL3-219ENST00000495172 AGAP4Q96P64 663 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 SLC2A13Q96QE2 648 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 SMIM14Q96QK8 99 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 RAB6CQ9H0N0 254 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 CLEC4MQ9H2X3 399 aaPredicted RBP8.69□□□□□ -1.02
GARNL3-219ENST00000495172 KCTD10Q9H3F6 313 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 THAP9Q9H5L6 903 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 STN1Q9H668 368 aaKnown RBP8.69□□□□□ -1.02
GARNL3-219ENST00000495172 ATP13A2Q9NQ11 1180 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 ZNF624Q9P2J8 865 aaPredicted RBP8.69□□□□□ -1.02
GARNL3-219ENST00000495172 B4GALT6Q9UBX8 382 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 FBXL4Q9UKA2 621 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 LIMCH1Q9UPQ0 1083 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 PCDHB4Q9Y5E5 795 aa8.69□□□□□ -1.02
GARNL3-219ENST00000495172 KMT2CQ8NEZ4 4911 aaKnown RBP8.69□□□□□ -1.02
GARNL3-219ENST00000495172 TTC24A2A3L6 582 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-219ENST00000495172 TRIM64A6NGJ6 449 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 TRIM64BA6NI03 449 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 TOX3O15405 576 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-219ENST00000495172 PHF1O43189 567 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-219ENST00000495172 ATE1O95260 518 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 PDIA4P13667 645 aaKnown RBP8.68□□□□□ -1.02
GARNL3-219ENST00000495172 GTF2H1P32780 548 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 SLC19A1P41440 591 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 CAPZBP47756 277 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 SOX8P57073 446 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 RAD51Q06609 339 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 STK4Q13043 487 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 LBRQ14739 615 aaKnown RBP8.68□□□□□ -1.02
GARNL3-219ENST00000495172 SEPT7Q16181 437 aaKnown RBP8.68□□□□□ -1.02
GARNL3-219ENST00000495172 KRTAP24-1Q3LI83 254 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 CBWD6Q4V339 395 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 CBWD3Q5JTY5 395 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 CBWD5Q5RIA9 395 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 CFAP58Q5T655 872 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 AFMIDQ63HM1 303 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 FAM173BQ6P4H8 233 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 LRRC31Q6UY01 552 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 CEP128Q6ZU80 1094 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 Q6ZVL8 140 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 DPPA4Q7L190 304 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 ZNF354CQ86Y25 554 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 CDC20BQ86Y33 519 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 GRAMD1CQ8IYS0 662 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 TTC39CQ8N584 583 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 FBXL13Q8NEE6 735 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 DHX58Q96C10 678 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 MBD6Q96DN6 1003 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 INTS4Q96HW7 963 aaKnown RBP8.68□□□□□ -1.02
GARNL3-219ENST00000495172 TLR10Q9BXR5 811 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-219ENST00000495172 WDCPQ9H6R7 721 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 ACP6Q9NPH0 428 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 KCND1Q9NSA2 647 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 KBTBD4Q9NVX7 518 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 CGNQ9P2M7 1197 aaKnown RBP8.68□□□□□ -1.02
GARNL3-219ENST00000495172 KCNN3Q9UGI6 736 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 MFHAS1Q9Y4C4 1052 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 TENM1Q9UKZ4 2725 aa8.68□□□□□ -1.02
GARNL3-219ENST00000495172 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.68□□□□□ -1.022e-7■■■■■ 27.8
GARNL3-219ENST00000495172 SOCS6O14544 535 aa8.67□□□□□ -1.02
GARNL3-219ENST00000495172 TOXO94900 526 aa8.67□□□□□ -1.02
GARNL3-219ENST00000495172 ASMTLO95671 621 aa8.67□□□□□ -1.02
GARNL3-219ENST00000495172 UMODP07911 640 aa8.67□□□□□ -1.02
GARNL3-219ENST00000495172 F3P13726 295 aa8.67□□□□□ -1.02
GARNL3-219ENST00000495172 MXI1P50539 228 aa8.67□□□□□ -1.02
GARNL3-219ENST00000495172 GSDMDP57764 484 aa8.67□□□□□ -1.02
GARNL3-219ENST00000495172 PEX6Q13608 980 aa8.67□□□□□ -1.02
GARNL3-219ENST00000495172 GPR18Q14330 331 aa8.67□□□□□ -1.02
GARNL3-219ENST00000495172 C1orf189Q5VU69 101 aa8.67□□□□□ -1.02
GARNL3-219ENST00000495172 KRT39Q6A163 491 aa8.67□□□□□ -1.02
GARNL3-219ENST00000495172 RPUSD3Q6P087 351 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms