RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-208	ENST00000494728	GLYATL1	Q969I3	302 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	TEKT5	Q96M29	485 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	SLC38A3	Q99624	504 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	ADGRE3	Q9BY15	652 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	CARD9	Q9H257	536 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	C10orf88	Q9H8K7	445 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	MAGEE1	Q9HCI5	957 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	APMAP	Q9HDC9	416 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	BPIFA1	Q9NP55	256 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	SARS2	Q9NP81	518 aa	Known RBP	11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	KLC4	Q9NSK0	619 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	HAUS2	Q9NVX0	235 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	OGFR	Q9NZT2	677 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	PDP2	Q9P2J9	529 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	PCDHGA3	Q9Y5H0	932 aa		11.5	□□□□□ -0.57
VTI1A-208	ENST00000494728	NAV2	Q8IVL1	2488 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	hCG_1818297	A0A087WSY0	165 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	RGSL1	A5PLK6	1076 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	RCCD1	A6NED2	376 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	EFCAB7	A8K855	629 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728		A8MU76	341 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	GAPDHS	O14556	408 aa	Predicted RBP	11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	CHUK	O15111	745 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	PSTPIP1	O43586	416 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	DUX1	O43812	170 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	CST8	O60676	142 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	NDST3	O95803	873 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	SPTB	P11277	2137 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	BRAF	P15056	766 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	PTMS	P20962	102 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	UGT1A3	P35503	534 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	MAPK9	P45984	424 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	GFER	P55789	205 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	GPLD1	P80108	840 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	OLIG2	Q13516	323 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	SLC14A2	Q15849	920 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	SEPT7	Q16181	437 aa	Known RBP	11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	ATP13A5	Q4VNC0	1218 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	TEX44	Q53QW1	395 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	MANEA	Q5SRI9	462 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	KAZN	Q674X7	775 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	ANKS6	Q68DC2	871 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	MICALCL	Q6ZW33	695 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	ARHGAP22	Q7Z5H3	698 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	C11orf96	Q7Z7L8	435 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	ZNF605	Q86T29	641 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	FAM129C	Q86XR2	697 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	CNGA4	Q8IV77	575 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	TRAM1L1	Q8N609	369 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	AGBL5	Q8NDL9	886 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	NKD1	Q969G9	470 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	SGF29	Q96ES7	293 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	MED8	Q96G25	268 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	MRGPRX2	Q96LB1	330 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	PLEKHG4B	Q96PX9	1271 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	CTRC	Q99895	268 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	ZSCAN5A	Q9BUG6	496 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	MAK16	Q9BXY0	300 aa	Known RBP	11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	GPR63	Q9BZJ6	419 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	ZMYND15	Q9H091	742 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	OSGEPL1	Q9H4B0	414 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	RMI1	Q9H9A7	625 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	DDX56	Q9NY93	547 aa	Known RBP	11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	KLHL3	Q9UH77	587 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	INTU	Q9ULD6	942 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	DNAJC16	Q9Y2G8	782 aa		11.49	□□□□□ -0.57
VTI1A-208	ENST00000494728	USP9X	Q93008	2570 aa	Predicted RBP	11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	STMND1	H3BQB6	276 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	BUD23	O43709	281 aa	Known RBP	11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	SLC25A14	O95258	325 aa	Predicted RBP	11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	LCA5L	O95447	670 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	FAM87A	P0C7U9	286 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	LIF	P15018	202 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	ZFX	P17010	805 aa	Predicted RBP	11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	CD82	P27701	267 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	SLC1A1	P43005	524 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	HADHB	P55084	474 aa	Known RBP	11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	WNT3A	P56704	352 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	NFKB2	Q00653	900 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	PEX6	Q13608	980 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	SIRPB2	Q5JXA9	342 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	ZC3H18	Q86VM9	953 aa	Known RBP	11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	PHYKPL	Q8IUZ5	450 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	KATNAL2	Q8IYT4	538 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	ZNF567	Q8N184	647 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	OR10G6	Q8NH81	332 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	NAT14	Q8WUY8	206 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	TFB1M	Q8WVM0	346 aa	Known RBP	11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	TAAR9	Q96RI9	348 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	DDA1	Q9BW61	102 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	TRIM39	Q9HCM9	518 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	CPNE7	Q9UBL6	633 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	ALG6	Q9Y672	507 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	SLC30A1	Q9Y6M5	507 aa		11.48	□□□□□ -0.57
VTI1A-208	ENST00000494728	MN1	Q10571	1320 aa	Predicted RBP	11.48	□□□□□ -0.57

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