RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 GPR89BP0CG08 455 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 UGT1A5P35504 534 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 SPAM1P38567 509 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 PLA2G4EQ3MJ16 856 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 ZDHHC20Q5W0Z9 365 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 GDAP1Q8TB36 358 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 VPS35Q96QK1 796 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 APOL2Q9BQE5 337 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 NUDT22Q9BRQ3 303 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 SEMA6CQ9H3T2 930 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 IL26Q9NPH9 171 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 KCNK4Q9NYG8 393 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 TMPRSS11EQ9UL52 423 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 AAR2Q9Y312 384 aaKnown RBP32.81■■■□□ 2.84
CBX4-203ENST00000494546 LOXL2Q9Y4K0 774 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 CDRT15L2A8MXV6 281 aa32.8■■■□□ 2.84
CBX4-203ENST00000494546 ITGA2BP08514 1039 aa32.8■■■□□ 2.84
CBX4-203ENST00000494546 CD1CP29017 333 aa32.8■■■□□ 2.84
CBX4-203ENST00000494546 OLIG2Q13516 323 aa32.8■■■□□ 2.84
CBX4-203ENST00000494546 KHDC1Q4VXA5 237 aaKnown RBP32.8■■■□□ 2.84
CBX4-203ENST00000494546 NKAIN2Q5VXU1 208 aa32.8■■■□□ 2.84
CBX4-203ENST00000494546 ZNF761Q86XN6 746 aaPredicted RBP32.8■■■□□ 2.84
CBX4-203ENST00000494546 SLITRK4Q8IW52 837 aa32.8■■■□□ 2.84
CBX4-203ENST00000494546 RNF10Q8N5U6 811 aaKnown RBP32.8■■■□□ 2.84
CBX4-203ENST00000494546 TTC13Q8NBP0 860 aa32.8■■■□□ 2.84
CBX4-203ENST00000494546 KCNE4Q8WWG9 221 aa32.8■■■□□ 2.84
CBX4-203ENST00000494546 OSGEPL1Q9H4B0 414 aa32.8■■■□□ 2.84
CBX4-203ENST00000494546 KLC4Q9NSK0 619 aa32.8■■■□□ 2.84
CBX4-203ENST00000494546 CHUKO15111 745 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 CDK14O94921 469 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 JMJD7P0C870 316 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 MLLT3P42568 568 aaPredicted RBP32.79■■■□□ 2.84
CBX4-203ENST00000494546 FASLGP48023 281 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 PPM1FP49593 454 aaPredicted RBP32.79■■■□□ 2.84
CBX4-203ENST00000494546 CHRNA6Q15825 494 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 INSCQ1MX18 579 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 IYDQ6PHW0 289 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 FAM151BQ6UXP7 276 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 HES6Q96HZ4 224 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 SLC38A3Q99624 504 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 TSGA10Q9BZW7 698 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 PISDQ9UG56 409 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 GUCA1BQ9UMX6 200 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 SCN8AQ9UQD0 1980 aa32.79■■■□□ 2.84
CBX4-203ENST00000494546 VEGFDO43915 354 aa32.78■■■□□ 2.84
CBX4-203ENST00000494546 HHEXQ03014 270 aa32.78■■■□□ 2.84
CBX4-203ENST00000494546 TLE3Q04726 772 aa32.78■■■□□ 2.84
CBX4-203ENST00000494546 RANBP10Q6VN20 620 aa32.78■■■□□ 2.84
CBX4-203ENST00000494546 LRRTM4Q86VH4 590 aa32.78■■■□□ 2.84
CBX4-203ENST00000494546 JAMLQ86YT9 394 aa32.78■■■□□ 2.84
CBX4-203ENST00000494546 ZMYND15Q9H091 742 aa32.78■■■□□ 2.84
CBX4-203ENST00000494546 STN1Q9H668 368 aaKnown RBP32.78■■■□□ 2.84
CBX4-203ENST00000494546 PRDM8Q9NQV8 689 aa32.78■■■□□ 2.84
CBX4-203ENST00000494546 ARL5AQ9Y689 179 aa32.78■■■□□ 2.84
CBX4-203ENST00000494546 FAM208BQ5VWN6 2430 aa32.78■■■□□ 2.84
CBX4-203ENST00000494546 ZFC3H1O60293 1989 aaKnown RBP32.78■■■□□ 2.84
CBX4-203ENST00000494546 IGHV1OR21-1A0A087WYE8 117 aa32.77■■■□□ 2.84
CBX4-203ENST00000494546 GLYATL1P3A0A0U1RQE8 302 aa32.77■■■□□ 2.84
CBX4-203ENST00000494546 KMOO15229 486 aa32.77■■■□□ 2.84
CBX4-203ENST00000494546 STX7O15400 261 aaKnown RBP32.77■■■□□ 2.84
CBX4-203ENST00000494546 ZNF189O75820 626 aaPredicted RBP32.77■■■□□ 2.84
CBX4-203ENST00000494546 F3P13726 295 aa32.77■■■□□ 2.84
CBX4-203ENST00000494546 SLC2A4P14672 509 aa32.77■■■□□ 2.84
CBX4-203ENST00000494546 ADRA1AP35348 466 aa32.77■■■□□ 2.84
CBX4-203ENST00000494546 PTPRCAPQ14761 206 aa32.77■■■□□ 2.84
CBX4-203ENST00000494546 CLPPQ16740 277 aaPredicted RBP32.77■■■□□ 2.84
CBX4-203ENST00000494546 CMKLR1Q99788 373 aa32.77■■■□□ 2.84
CBX4-203ENST00000494546 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP32.77■■■□□ 2.84
CBX4-203ENST00000494546 SLC23A2Q9UGH3 650 aa32.77■■■□□ 2.84
CBX4-203ENST00000494546 DNAJC16Q9Y2G8 782 aa32.77■■■□□ 2.84
CBX4-203ENST00000494546 R3HDM2Q9Y2K5 976 aaKnown RBP32.77■■■□□ 2.84
CBX4-203ENST00000494546 A6NCN8 305 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 UGT1A9O60656 530 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 ZNF7P17097 686 aaPredicted RBP32.76■■■□□ 2.83
CBX4-203ENST00000494546 UGT1A6P19224 532 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 UGT1A1P22309 533 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 UGT1A4P22310 534 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 UGT1A3P35503 534 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 KLF1Q13351 362 aaPredicted RBP32.76■■■□□ 2.83
CBX4-203ENST00000494546 NFATC2Q13469 925 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 GTF2H3Q13889 308 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 CHCHD2P9Q5T1J5 151 aaPredicted RBP32.76■■■□□ 2.83
CBX4-203ENST00000494546 ZNF574Q6ZN55 896 aaPredicted RBP32.76■■■□□ 2.83
CBX4-203ENST00000494546 CLEC14AQ86T13 490 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 FAM71DQ8N9W8 422 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 TMEM159Q96B96 161 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 AHCYL2Q96HN2 611 aaKnown RBP32.76■■■□□ 2.83
CBX4-203ENST00000494546 TTC25Q96NG3 672 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 UGT1A7Q9HAW7 530 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 UGT1A10Q9HAW8 530 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 UGT1A8Q9HAW9 530 aa32.76■■■□□ 2.83
CBX4-203ENST00000494546 SARS2Q9NP81 518 aaKnown RBP32.76■■■□□ 2.83
CBX4-203ENST00000494546 TCRBV7S2A1N4TA0A589 114 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 GPR39O43194 453 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 KLK10O43240 276 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 KRT86O43790 486 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 PPFIA2O75334 1257 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 HOXB3P14651 431 aaPredicted RBP32.75■■■□□ 2.83
CBX4-203ENST00000494546 ITIH1P19827 911 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 CLCNKAP51800 687 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms