RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 KCNJ15Q99712 375 aa8.14□□□□□ -1.11
RIF1-211ENST00000494333 CPEB1Q9BZB8 566 aaKnown RBP8.14□□□□□ -1.11
RIF1-211ENST00000494333 CAAP1Q9H8G2 361 aa8.14□□□□□ -1.11
RIF1-211ENST00000494333 ZWILCHQ9H900 591 aa8.14□□□□□ -1.11
RIF1-211ENST00000494333 PDFQ9HBH1 243 aa8.14□□□□□ -1.11
RIF1-211ENST00000494333 TRIM39Q9HCM9 518 aa8.14□□□□□ -1.11
RIF1-211ENST00000494333 GCM1Q9NP62 436 aa8.14□□□□□ -1.11
RIF1-211ENST00000494333 UCKL1Q9NWZ5 548 aa8.14□□□□□ -1.11
RIF1-211ENST00000494333 DNAJC28Q9NX36 388 aa8.14□□□□□ -1.11
RIF1-211ENST00000494333 IPO11Q9UI26 975 aaKnown RBP8.14□□□□□ -1.11
RIF1-211ENST00000494333 PCDHGA1Q9Y5H4 931 aa8.14□□□□□ -1.11
RIF1-211ENST00000494333 CABIN1Q9Y6J0 2220 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 SPTY2D1-AS1A0A0U1RR47 76 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 SRRM3A6NNA2 597 aaPredicted RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 TAF4O00268 1085 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 ETV2O00321 342 aaPredicted RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 TRIM38O00635 465 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 FFAR2O15552 330 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 BUB1BO60566 1050 aaPredicted RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 RFPL3O75679 317 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 PIAS2O75928 621 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 PIGNO95427 931 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 GYPCP04921 128 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 TPM3P06753 285 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 C1SP09871 688 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 CDK4P11802 303 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 JUPP14923 745 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 CKMT2P17540 419 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 NAT1P18440 290 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 RABIFP47224 123 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 ACADVLP49748 655 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 ZNF135P52742 658 aaPredicted RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 HNRNPKP61978 463 aaKnown RBP eCLIP8.13□□□□□ -1.11
RIF1-211ENST00000494333 IL10RBQ08334 325 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 PDE1CQ14123 709 aaPredicted RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 FZD2Q14332 565 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 GRM3Q14832 879 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 SLC9A5Q14940 896 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 SMAD1Q15797 465 aaKnown RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 UGP2Q16851 508 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 CFAP58Q5T655 872 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 AFMIDQ63HM1 303 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 KYAT3Q6YP21 454 aaKnown RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 KDM7AQ6ZMT4 941 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 ARHGAP36Q6ZRI8 547 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 TMPRSS12Q86WS5 348 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 CAMK1DQ8IU85 385 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 ARHGAP12Q8IWW6 846 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 NPWQ8N729 165 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 PCDH19Q8TAB3 1148 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 HCAR2Q8TDS4 363 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 CXorf40AQ8TE69 158 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 CENPTQ96BT3 561 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 MAGEB10Q96LZ2 347 aaPredicted RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 ZNF641Q96N77 438 aaPredicted RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 WRAP53Q9BUR4 548 aaKnown RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 NUP85Q9BW27 656 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 CINPQ9BW66 212 aaPredicted RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 XPO4Q9C0E2 1151 aaKnown RBP8.13□□□□□ -1.11
RIF1-211ENST00000494333 DKK3Q9UBP4 350 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 IP6K2Q9UHH9 426 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 ANAPC7Q9UJX3 599 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.13□□□□□ -1.112e-17■□□□□ 9.3
RIF1-211ENST00000494333 PLXNA2O75051 1894 aa8.13□□□□□ -1.11
RIF1-211ENST00000494333 DOCK4Q8N1I0 1966 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 TRABD2BA6NFA1 517 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 NEMP2A6NFY4 417 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 MYO1FO00160 1098 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 RASGRP1O95267 797 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 CSF2P04141 144 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 KRT1P04264 644 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 CYP1A2P05177 515 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 GIMD1P0DJR0 217 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 COL6A2P12110 1019 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 SSR1P43307 286 aaKnown RBP8.12□□□□□ -1.11
RIF1-211ENST00000494333 RGRP47804 291 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 CSNK1DP48730 415 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 SCNN1BP51168 640 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 SUOXP51687 545 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 THOP1P52888 689 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 CLDN6P56747 220 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 PFN3P60673 137 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 SEMG2Q02383 582 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 BCL2L1Q07817 233 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 NSUN2Q08J23 767 aaKnown RBP eCLIP8.12□□□□□ -1.11
RIF1-211ENST00000494333 SLC10A7Q0GE19 358 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 ELP6Q0PNE2 266 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 DPYSQ14117 519 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 PTK2BQ14289 1009 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 DPYSL2Q16555 572 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 TMEM52BQ4KMG9 183 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 TPRG1LQ5T0D9 272 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 STEAP3Q658P3 488 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 TXNRD3NBQ6F5E7 133 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 BRAT1Q6PJG6 821 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 TMCO3Q6UWJ1 677 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 POLNQ7Z5Q5 900 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 FGD2Q7Z6J4 655 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 MILR1Q7Z6M3 343 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 SRLQ86TD4 932 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms