RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 GPRC6AQ5T6X5 926 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 N4BP2L1Q5TBK1 243 aaPredicted RBP17.03■□□□□ 0.32
LIME1-208ENST00000493265 STPG1Q5TH74 334 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 MRNIPQ6NTE8 343 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 KYAT3Q6YP21 454 aaKnown RBP17.03■□□□□ 0.32
LIME1-208ENST00000493265 MARK2Q7KZI7 788 aaKnown RBP17.03■□□□□ 0.32
LIME1-208ENST00000493265 ABI3BPQ7Z7G0 1075 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 SDCCAG8Q86SQ7 713 aaPredicted RBP17.03■□□□□ 0.32
LIME1-208ENST00000493265 RELL1Q8IUW5 271 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 PHYKPLQ8IUZ5 450 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 DENND6AQ8IWF6 608 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 NXPE1Q8N323 547 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 FBF1Q8TES7 1133 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 AENQ8WTP8 325 aaKnown RBP17.03■□□□□ 0.32
LIME1-208ENST00000493265 NAT14Q8WUY8 206 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 ULK4Q96C45 1275 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 MRRFQ96E11 262 aaKnown RBP17.03■□□□□ 0.32
LIME1-208ENST00000493265 FAM167BQ9BTA0 163 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 TEX101Q9BY14 249 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 PILRBQ9UKJ0 227 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 ANGPTL2Q9UKU9 493 aa17.03■□□□□ 0.32
LIME1-208ENST00000493265 OAS3Q9Y6K5 1087 aaKnown RBP17.03■□□□□ 0.32
LIME1-208ENST00000493265 A0A1B0GTW7 788 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 CFIP05156 583 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 GSTA2P09210 222 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 TRIM23P36406 574 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 MPLP40238 635 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 RABIFP47224 123 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 C21orf59P57076 290 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 PFN3P60673 137 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 CTBP1Q13363 440 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 DBN1Q16643 649 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 KHDC1Q4VXA5 237 aaKnown RBP17.02■□□□□ 0.32
LIME1-208ENST00000493265 AARS2Q5JTZ9 985 aaKnown RBP17.02■□□□□ 0.32
LIME1-208ENST00000493265 TPRG1LQ5T0D9 272 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 EMBQ6PCB8 327 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 ENPP7Q6UWV6 458 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 TRMT10CQ7L0Y3 403 aaKnown RBP17.02■□□□□ 0.32
LIME1-208ENST00000493265 DET1Q7L5Y6 550 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 SYT12Q8IV01 421 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 CTAGE3PQ8IX95 158 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 C1orf216Q8TAB5 229 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 CCDC97Q96F63 343 aaPredicted RBP17.02■□□□□ 0.32
LIME1-208ENST00000493265 DCUN1D1Q96GG9 259 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 VPS35Q96QK1 796 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 TXLNGYQ9BZA5 131 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 OR2AG1Q9H205 316 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 FBXO6Q9NRD1 293 aaPredicted RBP17.02■□□□□ 0.32
LIME1-208ENST00000493265 ZFATQ9P243 1243 aa17.02■□□□□ 0.32
LIME1-208ENST00000493265 TNRC6BQ9UPQ9 1833 aaKnown RBP17.01■□□□□ 0.31
LIME1-208ENST00000493265 A0A1B0GVT2 93 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 A0A1W2PR77 199 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 UBA6A0AVT1 1052 aaPredicted RBP17.01■□□□□ 0.31
LIME1-208ENST00000493265 SCAMP1O15126 338 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 NDUFS3O75489 264 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 SPAG6O75602 509 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 MYCLP1P12525 358 aaPredicted RBP17.01■□□□□ 0.31
LIME1-208ENST00000493265 MSH3P20585 1137 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 ACRV1P26436 265 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 HTR1BP28222 390 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 STX2P32856 288 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 SLC1A2P43004 574 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 AFF3P51826 1226 aaKnown RBP17.01■□□□□ 0.31
LIME1-208ENST00000493265 MPP1Q00013 466 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 NFATC4Q14934 902 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 EFTUD2Q15029 972 aaKnown RBP eCLIP17.01■□□□□ 0.31
LIME1-208ENST00000493265 TEAD4Q15561 434 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 MAP9Q49MG5 647 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 LDLRAP1Q5SW96 308 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 TCEAL6Q6IPX3 200 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 RD3Q7Z3Z2 195 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 SLC22A18ASQ8N1D0 253 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 MFSD2AQ8NA29 543 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 CALML6Q8TD86 181 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 DTX3LQ8TDB6 740 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 TCEAL3Q969E4 200 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 TTC1Q99614 292 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 COPS8Q99627 209 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 BOCQ9BWV1 1114 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 SMYD2Q9NRG4 433 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 ZDHHC3Q9NYG2 299 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 MOCS1Q9NZB8 636 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 SUSD2Q9UGT4 822 aa17.01■□□□□ 0.31
LIME1-208ENST00000493265 TRBV5-4A0A0C4DH59 114 aa17■□□□□ 0.31
LIME1-208ENST00000493265 TMEM202A6NGA9 273 aa17■□□□□ 0.31
LIME1-208ENST00000493265 CXorf49A8MYA2 514 aaPredicted RBP17■□□□□ 0.31
LIME1-208ENST00000493265 TLR4O00206 839 aa17■□□□□ 0.31
LIME1-208ENST00000493265 TM4SF5O14894 197 aa17■□□□□ 0.31
LIME1-208ENST00000493265 RIPK2O43353 540 aa17■□□□□ 0.31
LIME1-208ENST00000493265 OR1I1O60431 355 aa17■□□□□ 0.31
LIME1-208ENST00000493265 ERLIN1O75477 346 aa17■□□□□ 0.31
LIME1-208ENST00000493265 TEAD1P28347 426 aa17■□□□□ 0.31
LIME1-208ENST00000493265 ABCG1P45844 678 aa17■□□□□ 0.31
LIME1-208ENST00000493265 TTPAP49638 278 aa17■□□□□ 0.31
LIME1-208ENST00000493265 KIAA1024LP59773 190 aa17■□□□□ 0.31
LIME1-208ENST00000493265 YPEL5P62699 121 aa17■□□□□ 0.31
LIME1-208ENST00000493265 FRG1Q14331 258 aaKnown RBP17■□□□□ 0.31
LIME1-208ENST00000493265 KBTBD12Q3ZCT8 623 aa17■□□□□ 0.31
LIME1-208ENST00000493265 ZNF542PQ5EBM4 170 aa17■□□□□ 0.31
LIME1-208ENST00000493265 PLA2G2CQ5R387 149 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms