RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 VDAC3Q9Y277 283 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 NOTCH3Q9UM47 2321 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 A0A1W2PQ09 198 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 FAM172BPA6NC97 362 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 TNPO2O14787 897 aaKnown RBP3.3□□□□□ -1.88
VPS36-205ENST00000492650 CAPN9O14815 690 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 HSPA12AO43301 675 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 ENTPD3O75355 529 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 ATP1A1P05023 1023 aaKnown RBP3.3□□□□□ -1.88
VPS36-205ENST00000492650 ANOS1P23352 680 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 NFKBIAP25963 317 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 TLX1P31314 330 aaPredicted RBP3.3□□□□□ -1.88
VPS36-205ENST00000492650 TTKP33981 857 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 BSGP35613 385 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 GP5P40197 560 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 GARSP41250 739 aaKnown RBP3.3□□□□□ -1.88
VPS36-205ENST00000492650 PSMC6P62333 389 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 ZBTB17Q13105 803 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 AIMP2Q13155 320 aaKnown RBP3.3□□□□□ -1.88
VPS36-205ENST00000492650 TNFAIP1Q13829 316 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 ARHGEF6Q15052 776 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 PPP2R5BQ15173 497 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 SLC18A3Q16572 532 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 EDRF1Q3B7T1 1238 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 C2orf76Q3KRA6 126 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 ACCSLQ4AC99 568 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 CBWD5Q5RIA9 395 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 ERMARDQ5T6L9 678 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 IL20RBQ6UXL0 311 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 CCDC73Q6ZRK6 1079 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 FOXL2NBQ6ZUU3 175 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 ADGRA1Q86SQ6 560 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 METTL23Q86XA0 190 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 POMGNT2Q8NAT1 580 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 SPATA18Q8TC71 538 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 GRK7Q8WTQ7 553 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 GDPD5Q8WTR4 605 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 FIG4Q92562 907 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 VPS33AQ96AX1 596 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 FBXO17Q96EF6 278 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 GBP5Q96PP8 586 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 NR1H4Q96RI1 486 aaPredicted RBP3.3□□□□□ -1.88
VPS36-205ENST00000492650 APOL6Q9BWW8 343 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 MAK16Q9BXY0 300 aaKnown RBP3.3□□□□□ -1.88
VPS36-205ENST00000492650 SMARCAD1Q9H4L7 1026 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 EBF2Q9HAK2 575 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 VEZTQ9HBM0 779 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 LRRC4Q9HBW1 653 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 INTS10Q9NVR2 710 aaKnown RBP3.3□□□□□ -1.88
VPS36-205ENST00000492650 MRPL15Q9P015 296 aaKnown RBP3.3□□□□□ -1.88
VPS36-205ENST00000492650 MARCH4Q9P2E8 410 aaPredicted RBP3.3□□□□□ -1.88
VPS36-205ENST00000492650 UBA2Q9UBT2 640 aaPredicted RBP3.3□□□□□ -1.88
VPS36-205ENST00000492650 NDRG3Q9UGV2 375 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 SH3BGRL2Q9UJC5 107 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 ANAPC5Q9UJX4 755 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 TAF1P21675 1872 aa3.3□□□□□ -1.88
VPS36-205ENST00000492650 A0A0G2JPF8 293 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 A0A0U1RQK1 487 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 ZNF320A2RRD8 509 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 CPED1A4D0V7 1026 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 LIPT2A6NK58 231 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 A8MV72 311 aaPredicted RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 HNRNPCL3B7ZW38 293 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 PEX12O00623 359 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 TGFB1I1O43294 461 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 ZBTB14O43829 449 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 FGF17O60258 216 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 ZIC3O60481 467 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 HNRNPCL1O60812 293 aaKnown RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 KERAO60938 352 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 PAK4O96013 591 aaPredicted RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 SPARCP09486 303 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 HNRNPCL4P0DMR1 293 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 PCP11498 1178 aaKnown RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 CETPP11597 493 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 EEF2P13639 858 aaKnown RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 GAP43P17677 238 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 MAPK3P27361 379 aaPredicted RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 GLIPR1P48060 266 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 HSD17B4P51659 736 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 CSE1LP55060 971 aaKnown RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 POLR2FP61218 127 aaKnown RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 ECT2LQ008S8 904 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 ACTN3Q08043 901 aaPredicted RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 C17orf67Q0P5P2 114 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 TBL3Q12788 808 aaKnown RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 ZNF155Q12901 538 aaPredicted RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 RUNX2Q13950 521 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 CRYMQ14894 314 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 RAB41Q5JT25 222 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 ADALQ6DHV7 355 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 WDR73Q6P4I2 378 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 SHQ1Q6PI26 577 aaKnown RBP3.29□□□□□ -1.88
VPS36-205ENST00000492650 SLC26A9Q7LBE3 791 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 PRSS45Q7RTY3 260 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 ADGRF2Q8IZF7 708 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 C10orf53Q8N6V4 93 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 FRMD1Q8N878 549 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 POGLUT1Q8NBL1 392 aa3.29□□□□□ -1.88
VPS36-205ENST00000492650 KCNH5Q8NCM2 988 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms