RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 RBL1P28749 1068 aa17.78■□□□□ 0.44
HMGN1-219ENST00000491183 CTNNA1P35221 906 aaKnown RBP17.78■□□□□ 0.44
HMGN1-219ENST00000491183 CLCNKAP51800 687 aa17.78■□□□□ 0.44
HMGN1-219ENST00000491183 TMEM71Q6P5X7 295 aa17.78■□□□□ 0.44
HMGN1-219ENST00000491183 SLC25A41Q8N5S1 370 aa17.78■□□□□ 0.44
HMGN1-219ENST00000491183 LSM14AQ8ND56 463 aaKnown RBP17.78■□□□□ 0.44
HMGN1-219ENST00000491183 CCNL2Q96S94 520 aaPredicted RBP17.78■□□□□ 0.44
HMGN1-219ENST00000491183 LACRTQ9GZZ8 138 aa17.78■□□□□ 0.44
HMGN1-219ENST00000491183 SARS2Q9NP81 518 aaKnown RBP17.78■□□□□ 0.44
HMGN1-219ENST00000491183 PRDM8Q9NQV8 689 aa17.78■□□□□ 0.44
HMGN1-219ENST00000491183 SMG1Q96Q15 3661 aaKnown RBP17.77■□□□□ 0.44
HMGN1-219ENST00000491183 EIF4E1BA6NMX2 242 aaKnown RBP17.77■□□□□ 0.44
HMGN1-219ENST00000491183 APOC4-APOC2K7ER74 178 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 HGSO14964 777 aaPredicted RBP17.77■□□□□ 0.44
HMGN1-219ENST00000491183 MTX2O75431 263 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 APOC2P02655 101 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 THRAP10827 490 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 F3P13726 295 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 HMGCLP35914 325 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 ARSDP51689 593 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 COPS2P61201 443 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 GPLD1P80108 840 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 HHEXQ03014 270 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 SRSF6Q13247 344 aaKnown RBP17.77■□□□□ 0.44
HMGN1-219ENST00000491183 XRCC4Q13426 336 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 NFATC2Q13469 925 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 TRA2AQ13595 282 aaKnown RBP eCLIP17.77■□□□□ 0.44
HMGN1-219ENST00000491183 SLC1A5Q15758 541 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 ATP13A5Q4VNC0 1218 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 CRTC3Q6UUV7 619 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 CCDC81Q6ZN84 652 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 ZFAND4Q86XD8 727 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 ZNF547Q8IVP9 402 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 PLEKHG4BQ96PX9 1271 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 GORASP1Q9BQQ3 440 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 TRABDQ9H4I3 376 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 IL26Q9NPH9 171 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 KLC4Q9NSK0 619 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 AKAP7Q9P0M2 348 aaPredicted RBP17.77■□□□□ 0.44
HMGN1-219ENST00000491183 SCHIP1Q9P0W5 487 aaPredicted RBP17.77■□□□□ 0.44
HMGN1-219ENST00000491183 PDP2Q9P2J9 529 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 TRHDEQ9UKU6 1024 aa17.77■□□□□ 0.44
HMGN1-219ENST00000491183 AHCTF1Q8WYP5 2266 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 PRR19A6NJB7 356 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 BTNL10A8MVZ5 291 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 GPR89AB7ZAQ6 455 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 H7C0C1 242 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 C1QL1O75973 258 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 GPR89BP0CG08 455 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 LIPCP11150 499 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 CTNNA2P26232 953 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 CA5AP35218 305 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 ATP5OP48047 213 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 RHDQ02161 417 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 MPP3Q13368 585 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 AADACL2Q6P093 401 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 DTX1Q86Y01 620 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 PHYKPLQ8IUZ5 450 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 ACRBPQ8NEB7 543 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 IPMKQ8NFU5 416 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 ACTL9Q8TC94 416 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 TTC9Q92623 222 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 PMEPA1Q969W9 287 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 VPS35Q96QK1 796 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 DPYSL5Q9BPU6 564 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 OSBPL8Q9BZF1 889 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 B3GNT4Q9C0J1 378 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 IL17CQ9P0M4 197 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 RSPH14Q9UHP6 348 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 EFR3BQ9Y2G0 817 aa17.76■□□□□ 0.43
HMGN1-219ENST00000491183 KIR2DS5A0A0G2JLQ3 304 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 A0A0G2JNG1 304 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 KIR2DS3K7RE56 304 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 ERVH48-1M5A8F1 160 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 PJA2O43164 708 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 BUD23O43709 281 aaKnown RBP17.75■□□□□ 0.43
HMGN1-219ENST00000491183 VEGFDO43915 354 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 CDK14O94921 469 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 AGTP01019 485 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 ZNF7P17097 686 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-219ENST00000491183 NAP1L1P55209 391 aaKnown RBP17.75■□□□□ 0.43
HMGN1-219ENST00000491183 OTUD4Q01804 1114 aaKnown RBP17.75■□□□□ 0.43
HMGN1-219ENST00000491183 KIR2DS5Q14953 304 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 PLA2G4EQ3MJ16 856 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 KIAA1614Q5VZ46 1190 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 SLC9B2Q86UD5 537 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 LRRTM4Q86VH4 590 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 OR10G6Q8NH81 332 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 SH3KBP1Q96B97 665 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 AHCYL2Q96HN2 611 aaKnown RBP17.75■□□□□ 0.43
HMGN1-219ENST00000491183 CALR3Q96L12 384 aaKnown RBP17.75■□□□□ 0.43
HMGN1-219ENST00000491183 WDR70Q9NW82 654 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 OCIAD1Q9NX40 245 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 CPNE7Q9UBL6 633 aa17.75■□□□□ 0.43
HMGN1-219ENST00000491183 GRID2IPA4D2P6 1211 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 OR5K4A6NMS3 321 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 KMOO15229 486 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 UGT1A9O60656 530 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 PYGMP11217 842 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 SLC2A4P14672 509 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms