RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 AMZ1Q400G9 498 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 KHDC1Q4VXA5 237 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 TMEM71Q6P5X7 295 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 FOXR1Q6PIV2 292 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 WASH2PQ6VEQ5 465 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 ADGRG6Q86SQ4 1221 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 ZNF547Q8IVP9 402 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 KLHDC8BQ8IXV7 354 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 ZNF567Q8N184 647 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 BMPERQ8N8U9 685 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 KRT35Q92764 455 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 P3H4Q92791 437 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 USP7Q93009 1102 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 GLYATL1Q969I3 302 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 OXNAD1Q96HP4 312 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 CALR3Q96L12 384 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 MRGPRX2Q96LB1 330 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 PLEKHG4BQ96PX9 1271 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 VPS35Q96QK1 796 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 HERPUD2Q9BSE4 406 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 TRABDQ9H4I3 376 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 SUDS3Q9H7L9 328 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 SYNDIG1Q9H7V2 258 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 IL26Q9NPH9 171 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 WASH6PQ9NQA3 447 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 IL17CQ9P0M4 197 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 PISDQ9UG56 409 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 SLC23A2Q9UGH3 650 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 FAM153AQ9UHL3 310 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 TRHDEQ9UKU6 1024 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 TFR2Q9UP52 801 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 SHOC2Q9UQ13 582 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 REXO2Q9Y3B8 237 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 PRKAB1Q9Y478 270 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 PCDHA3Q9Y5H8 950 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 ZNF462Q96JM2 2506 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 KIR2DS5A0A0G2JLQ3 304 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 PRAMEF33A0A0G2JMD5 474 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 A0A0G2JNG1 304 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 BHMG1C9JSJ3 638 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 KIR2DS3K7RE56 304 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 VEGFDO43915 354 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 PRAMEF10O60809 474 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 PMPCBO75439 489 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 SLC25A14O95258 325 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 NDUFA10O95299 355 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 LIPCP11150 499 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 XRCC1P18887 633 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 NFKB1P19838 968 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 CTNNA1P35221 906 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 PTPN7P35236 360 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 EPHA4P54764 986 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 DYNLT1P63172 113 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 MSLNQ13421 630 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 KIR2DS5Q14953 304 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 SPA17Q15506 151 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 TGIF1Q15583 401 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 MAP9Q49MG5 647 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 SIRPB2Q5JXA9 342 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 PHF19Q5T6S3 580 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 ARHGAP40Q5TG30 622 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 AGAP9Q5VTM2 703 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 NKAIN2Q5VXU1 208 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 ABRAXAS1Q6UWZ7 409 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 RANBP10Q6VN20 620 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 CHST15Q7LFX5 561 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 KDELC2Q7Z4H8 507 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 ARHGAP22Q7Z5H3 698 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 C11orf96Q7Z7L8 435 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 TMTC1Q8IUR5 882 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 ZNF843Q8N446 348 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 AGBL5Q8NDL9 886 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 HTR3CQ8WXA8 447 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 SH3KBP1Q96B97 665 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 CCDC74BQ96LY2 380 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 QKIQ96PU8 341 aaKnown RBP eCLIP9.6□□□□□ -0.874e-7■■■■■ 40
TMEM39A-210ENST00000490099 TAAR9Q96RI9 348 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 GORASP1Q9BQQ3 440 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 DDA1Q9BW61 102 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 GPR63Q9BZJ6 419 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 EPB41L1Q9H4G0 881 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 KCNK4Q9NYG8 393 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 HACD3Q9P035 362 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 FOXJ2Q9P0K8 574 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 DUSP10Q9Y6W6 482 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 ATMQ13315 3056 aa9.6□□□□□ -0.87
TMEM39A-210ENST00000490099 PIEZO2Q9H5I5 2752 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 LILRA5A6NI73 299 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 APOC4-APOC2K7ER74 178 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 GAPDHSO14556 408 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 PJA2O43164 708 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 APOC2P02655 101 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 ACP5P13686 325 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 TNNT1P13805 278 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 BRAFP15056 766 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 CTNNA2P26232 953 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 ADRA1AP35348 466 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 CYLC1P35663 651 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 CHRNA4P43681 627 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 HHEXQ03014 270 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms